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Report for CCDS24664.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24664.1 Public Mus musculus 11 Ube2b 23 108 98 CCDS HistoryNCBI Gene:22210Re-query CCDS DB by CCDS ID:24664.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24664.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020657.12 ENSMUSP00000020657.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020657.12Link to Ensembl Protein Viewer:ENSMUSP00000020657.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000020657Re-query CCDS DB by Protein ID:ENSMUSP00000020657
Original member Current member EBI ENSMUST00000109086.7 ENSMUSP00000104714.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109086.7Link to Ensembl Protein Viewer:ENSMUSP00000104714.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000109086Re-query CCDS DB by Protein ID:ENSMUSP00000104714
Original member Current member NCBI NM_001362685.1 NP_001349614.1 Accepted alive Link to Nucleotide Sequence:NM_001362685.1Link to Protein Sequence:NP_001349614.1Re-query CCDS DB by Nucleotide ID:NM_001362685Re-query CCDS DB by Protein ID:NP_001349614Link to BLAST:NP_001349614.1
Original member Current member NCBI NM_009458.5 NP_033484.3 Accepted alive Link to Nucleotide Sequence:NM_009458.5Link to Protein Sequence:NP_033484.3Re-query CCDS DB by Nucleotide ID:NM_009458Re-query CCDS DB by Protein ID:NP_033484Link to BLAST:NP_033484.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001349614.1 152 P63147 152 100% 0 0
NP_033484.3 152 P63147 152 100% 0 0

Chromosomal Locations for CCDS 24664.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 51986682 51986810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 51988612 51988700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 51991394 51991483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 51995374 51995399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 51997818 51997898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 52000293 52000336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (459 nt):
ATGTCGACCCCGGCCCGTAGGAGGCTCATGCGGGATTTCAAGCGATTGCAAGAGGACCCACCTGTGGGGG
TCAGTGGCGCCCCATCTGAAAACAACATCATGCAGTGGAATGCAGTTATATTTGGACCAGAAGGGACACC
CTTTGAAGATGGTACTTTTAAACTAGTAATAGAATTTTCTGAAGAATATCCAAATAAACCACCAACCGTT
AGGTTTTTATCCAAAATGTTTCATCCAAATGTGTATGCTGATGGTAGCATATGTTTAGATATCCTGCAGA
ATCGATGGAGTCCCACATATGATGTCTCTTCCATCTTAACTTCCATTCAGTCTCTGCTGGATGAACCGAA
TCCAAACAGTCCAGCCAACAGCCAAGCAGCACAGCTTTATCAGGAAAACAAACGGGAGTATGAGAAGAGA
GTTTCGGCCATTGTTGAGCAAAGCTGGAATGATTCATAA

Translation (152 aa):
MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTV
RFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKR
VSAIVEQSWNDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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