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Report for CCDS47544.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47544.1 Public Homo sapiens 7 VWDE 24 110 108 CCDS HistoryNCBI Gene:221806Re-query CCDS DB by CCDS ID:47544.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47544.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000275358.8 ENSP00000275358.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000275358.8Link to Ensembl Protein Viewer:ENSP00000275358.3Re-query CCDS DB by Nucleotide ID:ENST00000275358Re-query CCDS DB by Protein ID:ENSP00000275358
Original member Current member NCBI NM_001135924.3 NP_001129396.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001135924.3Link to Protein Sequence:NP_001129396.1Re-query CCDS DB by Nucleotide ID:NM_001135924Re-query CCDS DB by Protein ID:NP_001129396Link to BLAST:NP_001129396.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129396.1 1590 Q8N2E2-1 1590 100% 0 0

Chromosomal Locations for CCDS 47544.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 12331183 12331197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12333465 12333568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12336141 12336236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12336988 12337083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12337177 12337272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12340322 12340417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12342059 12342154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12343083 12343178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12344195 12344290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12344374 12344469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12351573 12351713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12356111 12356330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12357265 12357515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12359578 12359692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12361147 12361251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12361366 12361521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12367357 12367493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12369545 12370509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12370656 12370864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12372977 12373247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12374689 12374762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12375010 12375227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12377776 12377920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12379477 12379566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12380486 12380733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12383536 12383601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12389127 12389358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12393594 12393778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 12403659 12403716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4773 nt):
ATGCCTGGCGGAGCCTGCGTGCTGGTGATCGCGCTGATGTTCCTGGCCTGGGGGGAAGCTCAGGAGTGCT
CTCCTGGGGGACACCAGTTTCTTCGGAGTCCTTATAGAAGTGTCCGTTTTGACTCATGGCACCTCCAGCA
GTCAGCTGTTCAAGACCTAATATGTGACCATTCCCTCTCCCCTGGATGGTATAGATTTCTCATCCTTGAC
AGACCTGCCGAGATGCCAACCAAATGTGTTGAGATGAACCATTGTGGAACTCAGGCCCCCATCTGGCTGT
CTCTGAGAGATTCAGAAACACTGCCATCTCCTGGGGAGATCAAGCAATTGACAGCTTGTGCAACATGGCA
GTTTTTGTTCAGCACTACAAAAGACTGCTGTCTCTTTCAAATCCCAGTGTCTGTAAGAAACTGTGGGAAC
TTTTCTGTATACTTACTACAACCAACTCAGGGATGTATGGGCTACTGTGCGGAAGCTATTTCTGATGCAC
GATTACACCCATGTGGTTCTGATGAAACTGAAACAGGAGGTGATTGTGTTCGTCAGCTGGCTGCCTCATT
GCCACCTCCACCTGCAGGAAGGCCAGAGGTTCTGGTGGAGTTGATTGAGTCCAGGCTTTTCTGTAGGTGT
TCTTTTGATGTTCCCGCTACAAAAAACTCAGTGGGATTTCACATAGCTTGGTCTAGGCTTTCTTCTCAAG
AAGTCAAAGAGGAGCTGACACAAGAGACCACAGTTCAGGCATTCTCTCTTTTAGAACTTGATGGCATAAA
TCTCAGACTTGGAGACAGGATATTCTGCAGCGCTTCTGTCTTTTTCTTGGAGAATCCTCATGTACAAAGT
GTAGCCATCGAAAGCCAAGAATTTTTTGCAGGCTTTAAGCTACAGCCTGAATTGAGCACTATATCAGAGG
ATGGGAAAGAATACTACCTGAGGATAGAAAGCACAGTTCCTATTATTTGTTCTGAATTTAGTGAGCTTGA
TCAAGAATGCAAAATCTCATTAAAACTGAAAACTATTGGTCAAGGTAGAGAGCACCTAGGCTTAAATTTG
GCACTGTCTTCCTGTCATGTGGACCTTCTCCAGACATCTTCCTGTGCTAATGGAACCTGTAGCCACACTT
TTGTGTACTACACTGCTGTCACAGATTTTTCTCGAGATGGAGATAGAGTCTCAAACATTGTAGTGCAACC
AATAGTTAATGAGGATTTCCTGTGGAACAACTACATTCCAGACAGCATCCAGATCAAAGTAAAGGATGTC
CCAACTGCTTACTGCTATACATTTACTGACCCACATATAATTACATTTGATGGCAGGGTATATGATAATT
TCAAGACTGGAACATTTGTGCTTTATAAGAGTATGTCACGTGATTTTGAAGTCCATGTACGTCAGTGGGA
CTGCAGAAGCCTTCACTATCCAGTGTCATGTAATTGTGGGTTTGTTGCCCAGGAAGGAGGTGATATAGTT
ACTTTTGATATGTGCAATGGTCAGCTACGTGAATCACAACCATATTTGTTCATAAAAAGCCAAGATGTAA
CCAGGAATATCAAGATAAGTGAATCTTACTTAGGAAGAAAAGTCACAATCTGGTTTTCTTCTGGGGCATT
TATCCGTGCTGATCTTGGTGAATGGGGCATGAGTCTAACGATCAGAGCCCCTAGTGTAGATTACAGAAAC
ACTCTGGGACTTTGTGGAACCTTTGATGAAAATCCGGAAAATGATTTCCATGACAAAAATGGGATGCAAA
TTGATCAAAATTTTAACAATTATGTTGCTTTTATTAATGAATGGAGGATTTTACCAGGAAAAAGCATGTC
TGACACACTGCCAGTTTCTATGACATCACCTGGAAAGCCATCCTATTGTAGCTGTTCATTGGACACTGCA
GCGTATCCGTCTTCCGAAGATCTGGACAGTGTTTCTCGATCAGAAATTGCCTTGGGTTGCAAAGACCTCA
ATCATGTCAGCTTATCTTCTTTGATACCAGAACTAGATGTCACCTCCGAATATATTAATTCAGACACTCT
TGTCAGAGAGATAAACAAGCATACATCTCCAGAAGAATATAATCTAAATTTATTTCTGCAAGAAAAAAAA
CACATAAACCTGACTAAACTCGGCTTAAATGTACAAAAACATCCTGGAAATGAGAAAGAAGATTCACTAC
AATATTTGGCCAATAAGAAATATACACAAGGCCGGGGAAGCCACAGCCAAGAAATGAGGTACAATCGACA
AAACAGATGGAAACGGCAGAACTTTCATGAGTTTCCTCCTTTGTTTGCTTTCCCGAGTCTCAGCCAAACG
GATCTGGAAGAACTTACTTATTTTTTCCCAGAGGACCATGCTGAGGATGTACAGCAAGAGTTTTTCCCCT
CTTGGCCCACTCCCTCTGGCCTCACCGAGTATAGCACCTTGACCCTCTGTCAGGAGACTCTAGCCAACTC
CAGCATAGGAAGGCTGTGTCTTGCTTTTCTTGGCAAGAGATTAGACAGTGTTATAGAGATGTGTGTGAAG
GATGTTCTGTTAAAAGATGATCTTAGTTGGGCAGAAGCAGGTGTGGCCCTTTTAGAAAATGAATGTGAAA
AGAGGATTGTGGAGGAGGGGAAATATAACACAGAAGAGTATGGCACATCAATTGAAGACATTCTCTCAGT
ATTAAAATGCCCCAATTTATGCAGCGGCAATGGGCAGTGCATGGAATGGGGGTGTGCGTGTTCCCCAAGC
TTTAGTTCCTATGACTGCAGTGATTCCTATGACAAAGCTCCTGAAATTACAGAGCTTGGGAATGCTGGAT
TCTGTGATGTTCAAAAATATAATTGTATGATGGTGAGAGTTTTTGGCAAAGGCTTCAAAGAATTACCTTC
AATTAAATGTGAAGTTACTAAGCTACAGTATAATAGCAGTGAATGGATGCCTGGAGAACCCATCTATACA
CAGACTGTTTTCCACAATAGCAGAGCTGTTGATTGTCAGCTGCCCACTGATGTTCAGCAGTTTGATACCA
TGGATCTGGTGGGTGGGAAACCAACTGGGAAGTGGCAGTTGAAGGTATCTAATGATGGTTATAAATTCAG
TAATCCCAAAATAACGGTCATATATGATGGTGCTTGCCAAGTTTGTGGTCTCTATAAAAATGACTCATGT
ACTATAAAGGAAAATGTTTGCATTATTGATGGACTCTGCTATGTTGAAGGAGACAAAAATCCAACCAGCC
CTTGTTTGATTTGTAGACCCAAAATTTCAAGATTTACTTGGTCATTTTTAGAAAACAACCAGCCCCCAGT
GATTCAAGCATTGCAAGACAAATTACAGACATTTTATGGTGAAAACTTTGAGTATCAGTTCGTGGCCTTC
GATCCAGAAGGTTCTGACATCCATTTTACGTTGGACTCTGGTCCTGAAGGGGCAAGTGTTTCCTCTGCAG
GGCTTTTTATGTGGAAAACAGATTTACTAACTACCCAACAAATTACTGTACGCCTTAATGATGACTGCGA
TGCTGAAACTAGAGTCACGATTGAGGTGACTGTGAAGTCTTGTGATTGCTTGAATGGTGGATCATGTGTA
TCTGATAGGAACTTTTCTCCAGGGAGTGGAGTGTACCTGTGTGTCTGCTTGCCTGGCTTCCATGGCAGCC
TTTGTGAAGTGGACATTAGTGGGTGCCAATCCAACCCTTGTGGTCTTGGCAGCTATATTAGTGGTTTTCA
CAGTTATTCCTGTGATTGTCCACCTGAGCTCAAAGTTGAAACACAGTTTGTAAATCAATTTACTACACAA
ACTGTGGTTCTCACAAGATCTGATAAAAGTGTAAATAAAGAAGAGGATGATAAAAATGCCCAAGGGAGAA
AGAGGCATGTTAAGCCAACAAGTGGAAATGCCTTCACCATTTGTAAATATCCATGTGGAAAAAGTAGGGA
GTGTGTTGCCCCAAACATCTGCAAATGTAAACCTGGTTACATTGGTTCTAACTGCCAAACTGCTCTTTGT
GACCCTGATTGCAAAAACCATGGAAAATGTATTAAGCCTAACATTTGTCAGTGTCTTCCAGGACATGGTG
GAGCAACCTGTGATGAAGAACATTGTAACCCACCTTGTCAACATGGTGGCACATGCTTGGCTGGGAATCT
CTGCACTTGTCCTTATGGTTTTGTAGGACCAAGGTGTGAAACAATGGTTTGTAACAGGCACTGTGAAAAT
GGAGGCCAGTGTCTTACACCAGATATTTGCCAGTGCAAACCTGGCTGGTATGGACCCACCTGTAGTACAG
CTTTGTGCGACCCTGTCTGCCTCAATGGTGGTTCGTGTAATAAGCCAAATACTTGCCTCTGTCCAAATGG
ATTCTTTGGGGAACACTGTCAGAATGCTTTCTGTCACCCTCCCTGTAAGAATGGTGGCCACTGCATGAGA
AATAATGTGTGCGTCTGTCGTGAAGGATACACTGGTAGGAGATTCCAAAAAAGCATCTGTGATCCTACGT
GCATGAATGGAGGAAAATGTGTGGGACCAAGCACTTGCTCTTGTCCTTCTGGTTGGAGTGGGAAACGATG
CAACACACCTATCTGCTTGCAGAAATGTAAAAACGGTGGTGAATGCATTGCGCCCAGCATATGCCATTGT
CCTTCCTCCTGGGAAGGAGTGCGGTGTCAAATACCAATTTGCAACCCAAAATGTCTTTATGGAGGCAGAT
GCATATTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGGAGTCAAATGTGAGAAGAAAATACAGAT
AAGACGCCATTGA

Translation (1590 aa):
MPGGACVLVIALMFLAWGEAQECSPGGHQFLRSPYRSVRFDSWHLQQSAVQDLICDHSLSPGWYRFLILD
RPAEMPTKCVEMNHCGTQAPIWLSLRDSETLPSPGEIKQLTACATWQFLFSTTKDCCLFQIPVSVRNCGN
FSVYLLQPTQGCMGYCAEAISDARLHPCGSDETETGGDCVRQLAASLPPPPAGRPEVLVELIESRLFCRC
SFDVPATKNSVGFHIAWSRLSSQEVKEELTQETTVQAFSLLELDGINLRLGDRIFCSASVFFLENPHVQS
VAIESQEFFAGFKLQPELSTISEDGKEYYLRIESTVPIICSEFSELDQECKISLKLKTIGQGREHLGLNL
ALSSCHVDLLQTSSCANGTCSHTFVYYTAVTDFSRDGDRVSNIVVQPIVNEDFLWNNYIPDSIQIKVKDV
PTAYCYTFTDPHIITFDGRVYDNFKTGTFVLYKSMSRDFEVHVRQWDCRSLHYPVSCNCGFVAQEGGDIV
TFDMCNGQLRESQPYLFIKSQDVTRNIKISESYLGRKVTIWFSSGAFIRADLGEWGMSLTIRAPSVDYRN
TLGLCGTFDENPENDFHDKNGMQIDQNFNNYVAFINEWRILPGKSMSDTLPVSMTSPGKPSYCSCSLDTA
AYPSSEDLDSVSRSEIALGCKDLNHVSLSSLIPELDVTSEYINSDTLVREINKHTSPEEYNLNLFLQEKK
HINLTKLGLNVQKHPGNEKEDSLQYLANKKYTQGRGSHSQEMRYNRQNRWKRQNFHEFPPLFAFPSLSQT
DLEELTYFFPEDHAEDVQQEFFPSWPTPSGLTEYSTLTLCQETLANSSIGRLCLAFLGKRLDSVIEMCVK
DVLLKDDLSWAEAGVALLENECEKRIVEEGKYNTEEYGTSIEDILSVLKCPNLCSGNGQCMEWGCACSPS
FSSYDCSDSYDKAPEITELGNAGFCDVQKYNCMMVRVFGKGFKELPSIKCEVTKLQYNSSEWMPGEPIYT
QTVFHNSRAVDCQLPTDVQQFDTMDLVGGKPTGKWQLKVSNDGYKFSNPKITVIYDGACQVCGLYKNDSC
TIKENVCIIDGLCYVEGDKNPTSPCLICRPKISRFTWSFLENNQPPVIQALQDKLQTFYGENFEYQFVAF
DPEGSDIHFTLDSGPEGASVSSAGLFMWKTDLLTTQQITVRLNDDCDAETRVTIEVTVKSCDCLNGGSCV
SDRNFSPGSGVYLCVCLPGFHGSLCEVDISGCQSNPCGLGSYISGFHSYSCDCPPELKVETQFVNQFTTQ
TVVLTRSDKSVNKEEDDKNAQGRKRHVKPTSGNAFTICKYPCGKSRECVAPNICKCKPGYIGSNCQTALC
DPDCKNHGKCIKPNICQCLPGHGGATCDEEHCNPPCQHGGTCLAGNLCTCPYGFVGPRCETMVCNRHCEN
GGQCLTPDICQCKPGWYGPTCSTALCDPVCLNGGSCNKPNTCLCPNGFFGEHCQNAFCHPPCKNGGHCMR
NNVCVCREGYTGRRFQKSICDPTCMNGGKCVGPSTCSCPSGWSGKRCNTPICLQKCKNGGECIAPSICHC
PSSWEGVRCQIPICNPKCLYGGRCIFPNVCSCRTEYSGVKCEKKIQIRRH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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