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Report for CCDS41099.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41099.1 Public Mus musculus X P2ry10b 23 108 98 CCDS HistoryNCBI Gene:213438Re-query CCDS DB by CCDS ID:41099.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41099.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000067249.2 ENSMUSP00000065588.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000067249.2Link to Ensembl Protein Viewer:ENSMUSP00000065588.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000067249Re-query CCDS DB by Protein ID:ENSMUSP00000065588
Original member Current member EBI ENSMUST00000167673.1 ENSMUSP00000133122.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000167673.1Link to Ensembl Protein Viewer:ENSMUSP00000133122.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000167673Re-query CCDS DB by Protein ID:ENSMUSP00000133122
Original member Current member EBI ENSMUST00000180182.1 ENSMUSP00000136348.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000180182.1Link to Ensembl Protein Viewer:ENSMUSP00000136348.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000180182Re-query CCDS DB by Protein ID:ENSMUSP00000136348
Original member Current member NCBI NM_001122595.1 NP_001116067.1 Accepted alive Link to Nucleotide Sequence:NM_001122595.1Link to Protein Sequence:NP_001116067.1Re-query CCDS DB by Nucleotide ID:NM_001122595Re-query CCDS DB by Protein ID:NP_001116067Link to BLAST:NP_001116067.1
Original member Current member NCBI NM_001122596.1 NP_001116068.1 Accepted alive Link to Nucleotide Sequence:NM_001122596.1Link to Protein Sequence:NP_001116068.1Re-query CCDS DB by Nucleotide ID:NM_001122596Re-query CCDS DB by Protein ID:NP_001116068Link to BLAST:NP_001116068.1
Original member Current member NCBI NM_175442.4 NP_780651.1 Accepted alive Link to Nucleotide Sequence:NM_175442.4Link to Protein Sequence:NP_780651.1Re-query CCDS DB by Nucleotide ID:NM_175442Re-query CCDS DB by Protein ID:NP_780651Link to BLAST:NP_780651.1

Chromosomal Locations for CCDS 41099.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 107171036 107172094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1059 nt):
ATGGGTAGCAACAGTACCAGCAGTGCTGAGAGTAATTGCAATGGCACTTATTTGACATTTCAATACTCTC
TGTATGCAACCACCTATATCTTCATATTCATCCCGGGTCTCCTGGCTAACAGTGTAGCCCTGTGGGTTCT
GTGCCGCTTCATCAGCAAGAAGAACAAGGCCATCATCTTCATGATCAACCTCTCAGTGGCAGACCTTGCT
CATGTCCTGTCCTTACCTCTTCGGATTTACTATTATATCAATCGTCACTGGCCATTCCAGAGGGCCCTTT
GCCTGCTGTGTTTCTATCTGAAATATCTCAACATGTATGCCAGCATTTTTTTCTTGACATGCATTAGCCT
TCAGAGGTGCCTCTTTCTCCTCAAGCCATTCAGAGCCAGAAACTGGAAGCGTAGGTATGATGTGGCTATC
AGTGCTGCTGTCTGGATCATTGTGGGGACTGCCTGTTTGCCACTTCCCATCCTGAGAAGTGCTGGCTTAG
CCAATAACAGTGAATCGTGCTTTGCTGATTTAGGACTTCAGGACATTACTATGGCTTCATCCATTGGCAT
GGTAACTGCAGCTGAACTTGGAGGGTTTGTATTGCCTGTTGTAATTATTACATATTGCACATGGAAAACA
AGAAAATCTTTACAGGAATTCCAAGATCCACCTCAAAATATTAAAGAGAGGAAAAAGGCTTTGAGAATGG
TTCTAATGTGTGCAGTGGTATTCATAGTCTGTTTCACTCCTTACCATCTCAACTTCCCATTCTTTATGAT
GGTAAAGCAACGTGTCTTTTCAAACTGTTCCTTTATTAGGAACACTCTATGTTTCCACATCATTTCCTTG
TGTCTTGCAAATCTGAATTGTTGTCTTGATCCAGTTGTGTATTATTTTATGACTTCAGAATTTCGTGATC
AATTTTCAGAACATGGGAATTTGGTCATCCAGTCATGTTTGCATTGTAAGGACAGTACTTTGGAAATTCG
TCAGAGGAAGGAGAATCTTCAGACTATCTCTCTGGAATGTTTGGATGTTCCAACACAATGTGATGAAATG
GTTATCTAA

Translation (352 aa):
MGSNSTSSAESNCNGTYLTFQYSLYATTYIFIFIPGLLANSVALWVLCRFISKKNKAIIFMINLSVADLA
HVLSLPLRIYYYINRHWPFQRALCLLCFYLKYLNMYASIFFLTCISLQRCLFLLKPFRARNWKRRYDVAI
SAAVWIIVGTACLPLPILRSAGLANNSESCFADLGLQDITMASSIGMVTAAELGGFVLPVVIITYCTWKT
RKSLQEFQDPPQNIKERKKALRMVLMCAVVFIVCFTPYHLNFPFFMMVKQRVFSNCSFIRNTLCFHIISL
CLANLNCCLDPVVYYFMTSEFRDQFSEHGNLVIQSCLHCKDSTLEIRQRKENLQTISLECLDVPTQCDEM
VI


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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