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Report for CCDS52432.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52432.1 Public Mus musculus 7 Mtg1 23 108 98 CCDS HistoryNCBI Gene:212508Re-query CCDS DB by CCDS ID:52432.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52432.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000036977.8 ENSMUSP00000036491.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000036977.8Link to Ensembl Protein Viewer:ENSMUSP00000036491.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000036977Re-query CCDS DB by Protein ID:ENSMUSP00000036491
Original member Current member NCBI NM_199301.2 NP_955005.2 Accepted alive Link to Nucleotide Sequence:NM_199301.2Link to Protein Sequence:NP_955005.2Re-query CCDS DB by Nucleotide ID:NM_199301Re-query CCDS DB by Protein ID:NP_955005Link to BLAST:NP_955005.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_955005.2 326 Q8R2R6 326 100% 0 0

Chromosomal Locations for CCDS 52432.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 140137665 140137773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140138319 140138383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140140196 140140300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140143738 140143818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140144341 140144397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140144630 140144720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140145998 140146059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140146811 140146907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140147253 140147334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140149748 140149860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140150155 140150273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (981 nt):
ATGAGGCTGTGGCCGCAGGCATGGGGTGCCGTCCGGGGCGCTTGGCGCGAGTGCTTCCCTCTGCAAGGTC
ACGATGTAGCACGCTGGTTCCCCGGCCACATGGCCAAGGGACTAAAGAAGATGCAGAGCAGTCTGAAGTC
GGTGGATTGTGTTATCGAGGTTCATGACGCCAGGATCCCATTTTCAGGTCGAAACCCTCTGTTCCAAGAG
CTGCTTGGTCTGAAACCGCATCTGCTTGTCCTCAACAAAATGGACTTGGCAGATCTTACAGAGCAGCAGA
AAATTGTCCAGCGCTTAGAAGAAAAAGGCCTGAGCAACGTTCTCTTCACGAACTGTGTGAAAGATGAAAA
CATCAAGCAGATTGTCCCAAAAGTCATGGAACTGATCAGGTGCAGCTACCGCTACCATCGAGCCGAGACC
CCAGAATACTGCATCATGGTGGTCGGTGTCCCCAATGTAGGCAAATCCTCCCTCATCAACTCCCTGAGGC
GGCAGCACCTCAGGACAGGAAAAGCTGCCAGAGTGGGAGGTGAGCCAGGAATCACAAGAGCTGTGACATC
CAGAATCCAGGTATGTGAGCGTCCACTGGTATTCTTGCTGGATACTCCTGGGGTGCTGGCTCCTCGGATT
GAAAGCGTGGAGACAGGCCTGAAGCTGGCCCTGTGTGGAACTGTGTTGGACCACCTTGTTGGGGAAGAGA
CCATGGCCGATTATCTCCTTTACACCCTCAACAGGCATGGGCTCTTTGGGTATGTGCAGCACTATGCCCT
GGCCAGCGCCTGTGACCAAATAGAGTGGGTGCTGAAGAACGTGGCTATCAAGCTGAGGAAGACGCGGAAA
GTGAAGGTTCTCACAGGCACAGGTAATGTCAATGTTATCCAGCCTGATTATGCCATGGCAGCCCGAGACT
TCCTCCGGACCTTCCGCAGTGGGCTGTTGGGCCAGGTGATGCTGGACCGTGACATTATACCTGCTTGCTG
A

Translation (326 aa):
MRLWPQAWGAVRGAWRECFPLQGHDVARWFPGHMAKGLKKMQSSLKSVDCVIEVHDARIPFSGRNPLFQE
LLGLKPHLLVLNKMDLADLTEQQKIVQRLEEKGLSNVLFTNCVKDENIKQIVPKVMELIRCSYRYHRAET
PEYCIMVVGVPNVGKSSLINSLRRQHLRTGKAARVGGEPGITRAVTSRIQVCERPLVFLLDTPGVLAPRI
ESVETGLKLALCGTVLDHLVGEETMADYLLYTLNRHGLFGYVQHYALASACDQIEWVLKNVAIKLRKTRK
VKVLTGTGNVNVIQPDYAMAARDFLRTFRSGLLGQVMLDRDIIPAC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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