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Report for CCDS26882.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26882.1 Public Mus musculus 14 Pde12 23 108 98 CCDS HistoryNCBI Gene:211948Re-query CCDS DB by CCDS ID:26882.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26882.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052932.9 ENSMUSP00000059666.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052932.9Link to Ensembl Protein Viewer:ENSMUSP00000059666.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000052932Re-query CCDS DB by Protein ID:ENSMUSP00000059666
Original member NCBI NM_178668.3 NP_848783.3 Updated not alive Link to Nucleotide Sequence:NM_178668.3Link to Protein Sequence:NP_848783.3Re-query CCDS DB by Nucleotide ID:NM_178668Re-query CCDS DB by Protein ID:NP_848783
Current member NCBI NM_178668.4 NP_848783.3 Accepted alive Link to Nucleotide Sequence:NM_178668.4Link to Protein Sequence:NP_848783.3Re-query CCDS DB by Nucleotide ID:NM_178668Re-query CCDS DB by Protein ID:NP_848783Link to BLAST:NP_848783.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848783.3 608 Q3TIU4 608 100% 0 0

Chromosomal Locations for CCDS 26882.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 26665525 26665967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 26666378 26666456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 26668248 26669552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1827 nt):
ATGTGGAGGCTCCCGGGCCGCAGCGCGCTTCGTGGGGTCCGGTCGGTGGTGGAGCGGCGCAGCCGGGCCG
AGGCAGGGACTCACGAGGCGGTGCGCGCCATGGAGCGCGCGGTGGTGCGCTGTGTGCCCTCGGAGCCCAA
GCTCAGCCTGTCTTTCGCGTTGGCCGACGGCAGCCACAAAAACATGCAGAGGGACCAGAGCGAGCCTCTG
GGCCGGGCCCTCAGCCGGATCGCTACCAACGCCCTCAAGGGACACGCAAAGGTAGCGGCCGCCAAGAAGA
GCAGGAAGAACCGAGCCCACTCGAGCGGTGGCGCGGCCTGTGAGGCTACAGGGCCTGAGCCGGTTGCGAC
CTGCGAGCCGGTGGTGAAGCTGTACTACCGGGAGGAGGCGGTGGCCGAGGATGTGCTCAATGTGGACGCC
TGGCAGGACGGAGCGGTGCTGCAGATCGGCGACGTCAAGTACAAGGTGGAGCGCAACCCGCCCACCTTCA
CGGAGCTGCAGTTGCCGCGCTACATCATGGCTGGCTTCCCTGTGTGCCCCAAACTCGGCGTGGAATTTGG
GGATCCCGCCAGCTCCGTGTTCCGCTGGTACAAGGAAGTCAAACCCGGGGCGGCAGAACCTGGGGACAGC
GGCCCCGCGTCCTCGTCTCACTCTTCGCAGCCTTCAGCTTGGATCGAGACCGGTGTGGACGAGCGCGTCT
ACACCCCGTGCAATGCAGACATCGGGCTCCGGCTCCGGCTTCACTGTACACCGGGCAATGGGCAGCGCTT
CGGGCCAAGCCGGGAGCTAGAAAGCCTGTGCCCGGTGGAGGCCGGGCCTGGCACCTGCACTTTTGACCAT
CGACATCTGTACACCAAGAAGGTGACGGAGGACTCTTTCATCCGCACTGTCTCCTACAACATCCTGGCAG
ACACGTACGCCCAGACTGAGTTCTCTCGGACGGTCTTGTACCCGTACTGTGCCCCCTACGCCCTGGAGCT
TGACTACCGCCAGAATCTCATACAGAAGGAGCTCACAGGCTACAACGCAGACCTCATCTGTTTGCAGGAG
GTGGACCGCGCGGTGTTCTCCGACAGCTTGGTACCGGCCCTGGAGGCCTTCGGGCTGGAGGGCGTGTTCC
GAATCAAGCAGCACGAAGGCCTGGCCACTTTCTACCGGAAGTCCAAGTTCAGGCTCCTTAGTCAACATGA
CATCTCTTTTCAAGAAGCCCTCAAGTCGGACCCACTGCACAAAGAATTACTAGAGAAGCTGGCTTTGAAC
CCATTAGCACAGGAGAAGGTCCTCCAGAGGTCATCTGTCCTTCAGATTTCAGTTCTTCAGTCTACAACAG
ACTCTTCCAAAAAGATATGTGTTGCTAATACCCATCTCTACTGGCACCCAAAAGGTGGATACATTCGTCT
CATTCAAATGGAAGTAGCCTTGGTTCATATTAGACATGTCTCACGTGATCTCTATCCTGGCATACCAGTT
ATATTTTGTGGAGACTTTAATAGTACACCATCAACAGGCATGTATCATTTTGTCATCAGTGGCAGCATTG
CAGAGGATCATGAAGACTGGGCTTCCAATGGGGAAGAGGAGAGATGCAGCATGCCTCTCTCACACTGTTT
CAAACTGAAGAGTGCTTGTGGTGAACCTGCCTACACAAATTATGTCGGTGGCTTTCACGGATGTCTAGAT
TACATTTTCATTGACTTAAATACTTTAGAGGTTGAACAGGTGATTCCATTACCTAGTCATGAAGAAGTTA
CCACCCACCAGGCCTTACCTAGTGTTTCTCATCCTTCTGATCACATAGCACTTGTATGTGACTTAAAATG
GAAATAG

Translation (608 aa):
MWRLPGRSALRGVRSVVERRSRAEAGTHEAVRAMERAVVRCVPSEPKLSLSFALADGSHKNMQRDQSEPL
GRALSRIATNALKGHAKVAAAKKSRKNRAHSSGGAACEATGPEPVATCEPVVKLYYREEAVAEDVLNVDA
WQDGAVLQIGDVKYKVERNPPTFTELQLPRYIMAGFPVCPKLGVEFGDPASSVFRWYKEVKPGAAEPGDS
GPASSSHSSQPSAWIETGVDERVYTPCNADIGLRLRLHCTPGNGQRFGPSRELESLCPVEAGPGTCTFDH
RHLYTKKVTEDSFIRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQE
VDRAVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFRLLSQHDISFQEALKSDPLHKELLEKLALN
PLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMEVALVHIRHVSRDLYPGIPV
IFCGDFNSTPSTGMYHFVISGSIAEDHEDWASNGEEERCSMPLSHCFKLKSACGEPAYTNYVGGFHGCLD
YIFIDLNTLEVEQVIPLPSHEEVTTHQALPSVSHPSDHIALVCDLKWK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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