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Report for CCDS12183.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12183.2 Public Homo sapiens 19 MCEMP1 24 110 108 CCDS HistoryNCBI Gene:199675Re-query CCDS DB by CCDS ID:12183.2See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 12183.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000333598.8 ENSP00000329920.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000333598.8Link to Ensembl Protein Viewer:ENSP00000329920.3Re-query CCDS DB by Nucleotide ID:ENST00000333598Re-query CCDS DB by Protein ID:ENSP00000329920
Original member Current member NCBI NM_174918.3 NP_777578.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_174918.3Link to Protein Sequence:NP_777578.3Re-query CCDS DB by Nucleotide ID:NM_174918Re-query CCDS DB by Protein ID:NP_777578Link to BLAST:NP_777578.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_777578.3 174 Q8IX19-2 174 100% 0 0

Chromosomal Locations for CCDS 12183.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 7677121 7677175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7677637 7677726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7678104 7678241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7678350 7678400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7678491 7678604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7678924 7678983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7679098 7679114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (525 nt):
ATGCAAGCACCAGCCTTCAGGGACAAGAAACAGGGGGTCTCAGCCAAGAATCAAGGTGCCCATGACCCAG
ACTATGAGAATATCACCTTGGCCTTCAAAAATCAGGACCATGCAAAGGGTGGTCATTCACGACCCACGAG
CCAAGTCCCAGCCCAGTGCAGGCCGCCCTCAGACTCCACCCAGGTCCCCTGCTGGTTGTACAGAGCCATC
CTGAGCCTGTACATCCTCCTGGCCCTGGCCTTTGTCCTCTGCATCATCCTGTCAGCCTTCATCATGGTGA
AGAATGCTGAGATGTCCAAGGAGCTGCTGGGCTTTAAAAGGGAGCTTTGGAATGTCTCAAACTCCGTACA
AGCATGCGAAGAGAGACAGAAGAGAGGCTGGGATTCCGTTCAGCAGAGCATCACCATGGTCAGGAGCAAG
ATTGATAGATTAGAGACGACATTAGCAGGCATAAAAAACATTGACACAAAGGTACAGAAAATCTTGGAGG
TGCTGCAGAAAATGCCACAGTCCTCACCTCAATAA

Translation (174 aa):
MQAPAFRDKKQGVSAKNQGAHDPDYENITLAFKNQDHAKGGHSRPTSQVPAQCRPPSDSTQVPCWLYRAI
LSLYILLALAFVLCIILSAFIMVKNAEMSKELLGFKRELWNVSNSVQACEERQKRGWDSVQQSITMVRSK
IDRLETTLAGIKNIDTKVQKILEVLQKMPQSSPQ


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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