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Report for CCDS26726.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26726.1 Public Mus musculus 13 Naip2 23 108 98 CCDS HistoryNCBI Gene:17948Re-query CCDS DB by CCDS ID:26726.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26726.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000067975.11 ENSMUSP00000070827.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000067975.11Link to Ensembl Protein Viewer:ENSMUSP00000070827.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000067975Re-query CCDS DB by Protein ID:ENSMUSP00000070827
Original member Current member EBI ENSMUST00000117913.7 ENSMUSP00000113890.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000117913.7Link to Ensembl Protein Viewer:ENSMUSP00000113890.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000117913Re-query CCDS DB by Protein ID:ENSMUSP00000113890
Original member Current member NCBI NM_001126182.2 NP_001119654.1 Accepted alive Link to Nucleotide Sequence:NM_001126182.2Link to Protein Sequence:NP_001119654.1Re-query CCDS DB by Nucleotide ID:NM_001126182Re-query CCDS DB by Protein ID:NP_001119654Link to BLAST:NP_001119654.1
Original member Current member NCBI NM_010872.3 NP_035002.2 Accepted alive Link to Nucleotide Sequence:NM_010872.3Link to Protein Sequence:NP_035002.2Re-query CCDS DB by Nucleotide ID:NM_010872Re-query CCDS DB by Protein ID:NP_035002Link to BLAST:NP_035002.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001119654.1 1447 Q9QUK4 1447 100% 0 0
NP_035002.2 1447 Q9QUK4 1447 100% 0 0

Chromosomal Locations for CCDS 26726.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 100144359 100144723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100148708 100148872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100152070 100152156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100152494 100152646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100154855 100155022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100160121 100162364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100162842 100162899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100166469 100166550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100178247 100178346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100179349 100179468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100182905 100182956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100183757 100183838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100187393 100187492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100188831 100189398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4344 nt):
ATGGCAGCCCAGGGAGAAGCCGTTGAGGAGATAATTTGTGAGTTTGATGACGACTTGGTCTCTGAGCTCT
CTACTCTTCTCAGAGTGGATGCACTTTCAGTCTTGAAGAGACAACAAGAAGAAGACCATAAAACACGAAT
GAAAATGAAGAAAGGTTTTAACTCACAGATGCGCAGTGAAGCCAAACGACTAAAGACTTTTGAGACCTAT
GACAAGTTCAGATCATGGACGCCACAGGAGATGGCAGCTGCTGGGTTTTACCACACAGGGGTGAAACTTG
GGGTTCAGTGCTTTTGCTGTAGCTTGATCCTCTTTTCCACCAGACTCAGGAAACTTCCCATAGAGAACCA
CAAGAAATTACGACCAGAATGTGAGTTCCTTCTGGGCAAAGATGTTGGTAACATTGGCAAGTATGACATC
CGGGTTAAGAGTCCAGAGAAGATGCTGAGAGGTGACAAAGCAAGGTACCATGAAGAGGAGGCAAGACTGG
AGTCCTTTGAGGACTGGCCATTTTATGCCCATGGGACATCACCACGTGTACTCTCAGCAGCTGGCTTTGT
CTTTACAGGTAAAAGGGACACTGTGCAGTGTTTCTCCTGTGGTGGATGCTTGGGCAACTGGGAAGAAGGA
GATGATCCCTGGAAGGAGCATGCCAAGTGGTTCCCCAAATGTGAATTTCTTCAAAGTAAGAAGTCCCCAG
AGGAAATTACCCAATATGTACAAAGCTATGAAGGATTTCTTCATGTAACGGGAGAACATTTTGTGAATTC
CTGGGTCAGAAGAGAATTACCTATGGTATCAGCTTACTGCAATGACAGCGTCTTCGCTAATGAAGAACTA
AGGATGGACACGTTTAAGGACTGGCCCCACGAATCACCCGGGGCTGTTGAAGCTCTGGTCAAAGCAGGCC
TTTTCTACACAGGCAAAAGGGACATTGTCCAGTGTTTTTCCTGTGGAGGATGTATGGAGAAGTGGGCAGA
AGGTGACAACCCAATAGAAGATCACACCAAGTTTTTTCCCAACTGTGTGTTTCTCCAAACCCTGAAGTCC
TCTGCAGAAGTGATTCCAGCCCTTCAGAGCCACTGTGCACTTCCAGAAGCCATGGAAACCACAAGTGAAA
GCAACCATGATGATGCAGCAGCAGTTCATTCTACAGTGGTGGATGTTTCTCCAAGTGAAGCCCAGGAACT
TGAACCTGCATCCAGCTTGGTGTCTGTTCTCTGTAGAGACCAGGACCACAGTGAAGCCCAAGGGCGTGGA
TGTGCATCCAGTGGGACCTATCTTCCCTCCACAGACTTGGGTCAGAGTGAAGCCCAGTGGCTTCAAGAGG
CCAGGAGTCTGAGTGAGCAGCTGAGAGACACCTACACCAAAGCTACTTTCCGCCACATGAACTTGCCAGA
AGTGTACTCCAGCCTCGGCACTGACCATTTGCTCAGCTGCGATGTGTCCATCATTTCAAAGCACATCAGC
CAGCCAGTGCAAGGGTCCCTGACGATCCCTGAGGTCTTCTCCAATCTCAACTCTGTCATGTGTGTGGAGG
GGGAAGCTGGCAGTGGAAAGACAACCTTCCTGAAGAGGATAGCTTTTCTCTGGGCATCAGGATGCTGCCC
CCTGTTGTACAGGTTCCAGCTGGTCTTCTACCTCTCCCTTAGTTCCATCACACCAGGCCAGGAACTGGCC
AAAATCATCTGTGCCCAACTCCTAGGGGCAGGAGGCTGCATTAGTGAAGTGTGTCTGAGCAGCATCATCC
AGCAGTTACAACACCAGGTGCTGTTCCTGTTGGATGACTACAGTGGGCTGGCCTCACTCCCCCAAGCCCT
ACACACACTGATTACAAAAAACTACTTGTCACGGACCTGCTTATTGATCGCTGTGCATACAAACAAGGTC
AGGGGCATCCGCCCATACCTAGATACGAGTCTAGAGATCAAAGAGTTTCCCTTCTATAATACTGTCTCTG
TGTTACGGAAGCTTTTTTCACATGACATAATGCGTGTACGAAAATTTATAAATTACTTTGGATTTCATGA
AGAGTTGCAGGGAATTCACAAGACACCCCTCTTCGTGGCAGCAGTATGTACTGACTGGTTTAAAAATCCA
TCTGACCAGCCCTTTCAGGATGTGGCACTTTTCAAGGCCTATATGCAATACTTGTCCTTAAAGCACAAAG
GTGCAGCTAAGCCTCTCCAGGCCACAGTGTCCTCATGTGGGCAGCTGGCCTTGACAGGGCTTTTCTCATC
GTGCTTTGAGTTCAATAGTGATAACCTGGCAGAGGCAGGAGTTGATGAAGATGAAGAGCTCACCACCTGC
TTGATGAGCAAATTCACCGCCCAGAGACTGAGGCCAGTCTACCGGTTTTTAGGTCCTCTGTTCCAGGAGT
TTCTTGCTGCCGTGAGGTTGACTGAACTCCTGAGTTCAGATAGGCAGGAAGACCAAGATCTGGGACTTTA
TTATTTGAGACAAATTAACTCACCTCTAAAGGCTATGAGCATCTACCACACTTTTTTGAAATATGTCTCC
AGCCACCCTTCATCAAAGGCAGCGCCAACAGTTGTATCTCATTTGCTTCAGTTGGTGGATGAGAAAGAGT
CACTGGAGAACATGTCTGAAAATGAGGATTACATGAAGCTCCATCCAGAAGCTTTGCTGTGGATTGAGTG
TCTTAGAGGATTGTGGCAGCTGTCTCCTGAATCTTTTTCTTTGTTCATTTCAGAAAACTTATTGCGCATT
TGTCTAAACTTTGCTCATGAAAGCAACACAGTTGCTGCATGTTCTCCAGTTATTTTGCAGTTCCTTCGAG
GGAGAACACTGGATTTGAAAGTTTTGAGTTTACAGTACTTTTGGGACCATCCAGAAACCTTGTTGTTATT
GAAGAGTATTAAGATCTCATTAAATGGAAATAACTGGGTACAGAGAATCGATTTTTCACTCATAGAAAAA
TCTTTTGAAAAAGTACAGCCACCAACTATAGATCAGGACTATGCCATTGCCTTTCAACCTATAAATGAAG
TCCAGAAAAATTTATCTGAAAAGAAACACATAATAAAGAAGTATGAGGATATGAAACACCAGATCCCACT
AAATATTAGTACTGGCTACTGGAAACTGTCCCCCAAGCCATACAAGATCCCCAAGCTGGAAGTTCAAGTG
ACCAACACAGGTCCAGCAGATCAAGCACTGCTCCAGGTCCTCATGGAAGTCTTCTCAGCTTCACAGAGTA
TTGAGTTCCGTTTATCCGACAGCAGTGGCTTCCTTGAAAGCATCCGCCCAGCTCTGGAGCTGAGTAAGGC
CTCTGTCACCAAGTGTTCCATGTCCAGGCTGGAGCTCAGCAGAGAAGATCAGAAGCTGCTTCTCACCCTG
CCTACCCTGCAGTCTCTCGAGGTCTCAGAGACAAACCAGTTACCAGATCAGCTCTTCCATAACTTGCACA
AGTTCCTGGGCCTGAAAGAACTGTGTGTGAGACTAGATAGCAAGCCGGATGTGCTCTCAGTCCTTCCTGG
AGAGTTCCCAAACCTCCATCACATGGAGAAGTTATCCATCAGAACCTCCACGGAGTCTGACCTCTCCAAA
CTAGTTAAGTTGATTCAGAACTCTCCAAATCTCCATGTTTTCCATCTGAAGTGTAATTTCCTTTCGAATT
GTGAGCCTCTCATGACTGTGCTTGCTTCCTGCAAGAAACTCAGAGAGATTGAGTTTTCTGGACGATGCTT
TGAAGCCATGACCTTTGTCAACATTTTGCCAAATTTTGTTTTTCTGAAGATATTGAATCTTAGAGACCAA
CAATTCCCAGATAAAGAAACATCAGAAAAGTTTGCCCAGGCTCTGGGTTCTCTCAGGAACCTGGAGAAAC
TGTTCGTTCCCACTGGGGACGGGATTCACCAAGTGGCCAAACTGATTGTCCGGCAGTGTCTGCAGCTCCC
ATGTCTCCGAGTTCTTGTCTTTGCAGAGACTCTGGATGACGACAGTGTACTGGAAATTGCCAAGGGAGCA
ACCAGGGGAGGCTTCCAAAAACTTGAGAACTTAGACCTTACACTGAATCACAAGATTACAGAGGAAGGAT
ACAGAAATTTCTTTCAAGTCCTGGACAACCTGCCAAACCTGAAAAACCTGGACATTTCCAGGCATATCCC
AGAATGCATTCAAATTCAGGCCATCACTGTCAAGGCTCTGGGTCAGTGTGTGTCCCGACTGCCCAGCCTC
ACCAGGCTCGGGATGCTCAGTTGGCTCCTGGATGAAGAGGACATAAAAGTGATTAATGATGTGAAGGAAA
GACACCCTCAGTCCAAACGCTTGACTGTTCACTGGAGGTGGGTAGTGCCATTCTCTCCTGTCATTCAGAA
GTGA

Translation (1447 aa):
MAAQGEAVEEIICEFDDDLVSELSTLLRVDALSVLKRQQEEDHKTRMKMKKGFNSQMRSEAKRLKTFETY
DKFRSWTPQEMAAAGFYHTGVKLGVQCFCCSLILFSTRLRKLPIENHKKLRPECEFLLGKDVGNIGKYDI
RVKSPEKMLRGDKARYHEEEARLESFEDWPFYAHGTSPRVLSAAGFVFTGKRDTVQCFSCGGCLGNWEEG
DDPWKEHAKWFPKCEFLQSKKSPEEITQYVQSYEGFLHVTGEHFVNSWVRRELPMVSAYCNDSVFANEEL
RMDTFKDWPHESPGAVEALVKAGLFYTGKRDIVQCFSCGGCMEKWAEGDNPIEDHTKFFPNCVFLQTLKS
SAEVIPALQSHCALPEAMETTSESNHDDAAAVHSTVVDVSPSEAQELEPASSLVSVLCRDQDHSEAQGRG
CASSGTYLPSTDLGQSEAQWLQEARSLSEQLRDTYTKATFRHMNLPEVYSSLGTDHLLSCDVSIISKHIS
QPVQGSLTIPEVFSNLNSVMCVEGEAGSGKTTFLKRIAFLWASGCCPLLYRFQLVFYLSLSSITPGQELA
KIICAQLLGAGGCISEVCLSSIIQQLQHQVLFLLDDYSGLASLPQALHTLITKNYLSRTCLLIAVHTNKV
RGIRPYLDTSLEIKEFPFYNTVSVLRKLFSHDIMRVRKFINYFGFHEELQGIHKTPLFVAAVCTDWFKNP
SDQPFQDVALFKAYMQYLSLKHKGAAKPLQATVSSCGQLALTGLFSSCFEFNSDNLAEAGVDEDEELTTC
LMSKFTAQRLRPVYRFLGPLFQEFLAAVRLTELLSSDRQEDQDLGLYYLRQINSPLKAMSIYHTFLKYVS
SHPSSKAAPTVVSHLLQLVDEKESLENMSENEDYMKLHPEALLWIECLRGLWQLSPESFSLFISENLLRI
CLNFAHESNTVAACSPVILQFLRGRTLDLKVLSLQYFWDHPETLLLLKSIKISLNGNNWVQRIDFSLIEK
SFEKVQPPTIDQDYAIAFQPINEVQKNLSEKKHIIKKYEDMKHQIPLNISTGYWKLSPKPYKIPKLEVQV
TNTGPADQALLQVLMEVFSASQSIEFRLSDSSGFLESIRPALELSKASVTKCSMSRLELSREDQKLLLTL
PTLQSLEVSETNQLPDQLFHNLHKFLGLKELCVRLDSKPDVLSVLPGEFPNLHHMEKLSIRTSTESDLSK
LVKLIQNSPNLHVFHLKCNFLSNCEPLMTVLASCKKLREIEFSGRCFEAMTFVNILPNFVFLKILNLRDQ
QFPDKETSEKFAQALGSLRNLEKLFVPTGDGIHQVAKLIVRQCLQLPCLRVLVFAETLDDDSVLEIAKGA
TRGGFQKLENLDLTLNHKITEEGYRNFFQVLDNLPNLKNLDISRHIPECIQIQAITVKALGQCVSRLPSL
TRLGMLSWLLDEEDIKVINDVKERHPQSKRLTVHWRWVVPFSPVIQK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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