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Report for CCDS36862.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36862.1 Public Mus musculus 14 Msmb 23 108 98 CCDS HistoryNCBI Gene:17695Re-query CCDS DB by CCDS ID:36862.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36862.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022464.13 ENSMUSP00000022464.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022464.13Link to Ensembl Protein Viewer:ENSMUSP00000022464.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000022464Re-query CCDS DB by Protein ID:ENSMUSP00000022464
Original member Current member NCBI NM_020597.3 NP_065622.1 Accepted alive Link to Nucleotide Sequence:NM_020597.3Link to Protein Sequence:NP_065622.1Re-query CCDS DB by Nucleotide ID:NM_020597Re-query CCDS DB by Protein ID:NP_065622Link to BLAST:NP_065622.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065622.1 113 O08540 113 100% 0 0

Chromosomal Locations for CCDS 36862.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 32142072 32142074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32148076 32148181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32150163 32150265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32158067 32158196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (342 nt):
ATGGAAGCTTGGCTGGGCAGTCTCTTATTCCTTGCTACCATGGTGATAGCATCCAAAGCAGTATGTTCTA
TTGAAAATCGTGAGATATTTCCAAATCAAATGTCTGATGACTGCATGGATGCTGATGGTAACAAGCATTT
CCTTAACACTCCCTGGAAGAAGAACTGCACGTGGTGTTCATGTGACAAAACGTCAATCACCTGCTGTACC
AACGCTACTAGGCCTTTGAGCTATGACAAAGACAACTGTGATGTACAATTCCACCCAGAGAACTGCACCT
ACAGTGTGGTGGATCGGAAGAACCCAGGGAAGACCTGTCGAGTTGACAGCTGGACTATGTAA

Translation (113 aa):
MEAWLGSLLFLATMVIASKAVCSIENREIFPNQMSDDCMDADGNKHFLNTPWKKNCTWCSCDKTSITCCT
NATRPLSYDKDNCDVQFHPENCTYSVVDRKNPGKTCRVDSWTM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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