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Report for CCDS27663.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27663.1 Public Mus musculus 15 Grap2 23 108 98 CCDS HistoryNCBI Gene:17444Re-query CCDS DB by CCDS ID:27663.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27663.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000043149.8 ENSMUSP00000046532.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000043149.8Link to Ensembl Protein Viewer:ENSMUSP00000046532.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000043149Re-query CCDS DB by Protein ID:ENSMUSP00000046532
Original member Current member EBI ENSMUST00000229980.1 ENSMUSP00000155681.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000229980.1Link to Ensembl Protein Viewer:ENSMUSP00000155681.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000229980Re-query CCDS DB by Protein ID:ENSMUSP00000155681
Original member Current member NCBI NM_001289442.1 NP_001276371.1 Accepted alive Link to Nucleotide Sequence:NM_001289442.1Link to Protein Sequence:NP_001276371.1Re-query CCDS DB by Nucleotide ID:NM_001289442Re-query CCDS DB by Protein ID:NP_001276371Link to BLAST:NP_001276371.1
Original member Current member NCBI NM_010815.3 NP_034945.1 Accepted alive Link to Nucleotide Sequence:NM_010815.3Link to Protein Sequence:NP_034945.1Re-query CCDS DB by Nucleotide ID:NM_010815Re-query CCDS DB by Protein ID:NP_034945Link to BLAST:NP_034945.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001276371.1 322 O89100 322 100% 0 0
NP_034945.1 322 O89100 322 100% 0 0

Chromosomal Locations for CCDS 27663.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 80623737 80623814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80634336 80634427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80638445 80638564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80643645 80643810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80646137 80646352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80647858 80647974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80648423 80648602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (969 nt):
ATGGAAGCCACTGCCAAGTTTGATTTCATGGCCTCAGGTGAGGACGAACTGAGCTTTCGCACTGGAGACA
TTCTGAAGATACTAAGCAACCAGGAGGAGTGGCTCAAGGCGGAGCTCGGAAGCCAAGAAGGATATGTGCC
TAAGAATTTTATAGATATCGAGTTTCCTGAGTGGTTCCATGAAGGCCTCTCTCGACATCAAGCAGAAAAC
TTACTCATGGGCAAGGACATTGGATTCTTCATCATCAGGGCCAGCCAGAGTTCCCCAGGAGACTTCTCCA
TCTCTGTCAGGCACGAGGACGACGTTCAGCACTTCAAAGTCATGCGTGACACCAAGGGCAATTACTTCCT
GTGGACCGAGAAGTTCCCATCCTTAAATAAGCTGGTGGACTACTACCGGACAACGTCCATCTCCAAACAG
AAGCAGGTCTTCCTTCGGGATGGAACCCAAGATCAGGGTCACCGGGGCAACAGCCTGGACAGGAGGTCCC
AGGGCGGCCCTCACCCGAGTGGAACCGTAGGAGAAGAAATCCGACCTTCAGTGAACCGGAAGCTGTCAGA
CCACCTTCCTCTGGGTCCCCAGCAGTTCCACCCGCACCAGCAGCCGTCACCCCAGTTCACACCAGGGCCG
CAGCCCCCTCAACAGCAGCGTTATCTGCAGCATTTCCACCAGGACCGTCGTGGGGGCAGCCTGGACATAA
ACGATGGACACTGCGGCCTTGGAAGTGAGGTGAACGCCACGCTGATGCACCGGAGACACACCGACCCCGT
ACAACTCCAGGCAGCAGGGCGGGTGCGTTGGGCCAGGGCACTGTATGACTTTGAGGCTCTGGAAGAGGAC
GAGCTGGGATTCCGAAGCGGAGAAGTGGTTGAAGTCCTGGACAGCTCCAACCCATCTTGGTGGACCGGCC
GTCTGCACAACAAACTGGGTCTCTTCCCTGCCAACTATGTGGCCCCCATGATGCGATGA

Translation (322 aa):
MEATAKFDFMASGEDELSFRTGDILKILSNQEEWLKAELGSQEGYVPKNFIDIEFPEWFHEGLSRHQAEN
LLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTEKFPSLNKLVDYYRTTSISKQ
KQVFLRDGTQDQGHRGNSLDRRSQGGPHPSGTVGEEIRPSVNRKLSDHLPLGPQQFHPHQQPSPQFTPGP
QPPQQQRYLQHFHQDRRGGSLDINDGHCGLGSEVNATLMHRRHTDPVQLQAAGRVRWARALYDFEALEED
ELGFRSGEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAPMMR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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