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Report for CCDS44707.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44707.1 Public Homo sapiens 11 DEUP1 24 110 108 CCDS HistoryNCBI Gene:159989Re-query CCDS DB by CCDS ID:44707.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44707.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000298050.9 ENSP00000298050.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000298050.9Link to Ensembl Protein Viewer:ENSP00000298050.3Re-query CCDS DB by Nucleotide ID:ENST00000298050Re-query CCDS DB by Protein ID:ENSP00000298050
Original member Current member NCBI NM_181645.4 NP_857596.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_181645.4Link to Protein Sequence:NP_857596.2Re-query CCDS DB by Nucleotide ID:NM_181645Re-query CCDS DB by Protein ID:NP_857596Link to BLAST:NP_857596.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_857596.2 604 Q05D60-1 604 100% 0 0

Chromosomal Locations for CCDS 44707.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 93332260 93332288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 93355371 93355542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 93356948 93357043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 93364160 93364294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 93370073 93370186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 93371038 93371280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 93385398 93385543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 93389020 93389125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 93394459 93394656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 93396239 93396325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 93408231 93408427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 93415000 93415114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 93437543 93437719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1815 nt):
ATGGAGAACCAAGCCCATAATACGATGGGAACTTCTCCTTGTGAGGCTGAGCTTCAGGAATTAATGGAAC
AAATTGACATCATGGTAAGCAACAAGAAAATGGATTGGGAAAGAAAGATGCGGGCTTTGGAGACACGATT
AGATCTTCGGGATCAAGAATTGGCAAATGCACAAACTTGTTTGGATCAGAAAGGTCAAGAGGTAGGGTTA
CTTCGACAGAAATTGGACAGTCTGGAAAAATGTAATTTAGCAATGACTCAGAATTATGAAGGACAACTAC
AAAGCCTAAAGGCTCAATTTTCCAAACTAACAAATAACTTTGAAAAACTGAGATTACATCAGATGAAACA
AAACAAAGTTCCACGAAAAGAATTACCACACCTTAAAGAAGAAATACCCTTTGAACTGAGCAATTTGAAC
CAGAAATTAGAGGAATTTAGAGCAAAGTCAAGAGAATGGGACAAGCAAGAGATATTATATCAGACTCATC
TGATTTCTTTAGATGCTCAACAAAAATTATTATCTGAGAAGTGTAATCAGTTTCAGAAACAGGCACAAAG
TTACCAAACTCAACTAAATGGTAAAAAACAGTGCTTAGAAGACAGCAGCTCTGAAATTCCTCGTTTGATA
TGTGACCCAGATCCCAATTGTGAAATCAATGAAAGAGATGAGTTCATTATTGAAAAACTGAAATCAGCTG
TAAATGAGATAGCACTAAGCAGGAATAAATTACAAGATGAAAATCAGAAGCTCTTGCAAGAACTGAAAAT
GTACCAAAGACAGTGCCAGGCCATGGAAGCAGGTCTCTCAGAGGTAAAAAGTGAGTTACAGTCACGTGAT
GATCTCTTGAGAATTATAGAAATGGAACGATTGCAATTACACAGAGAATTATTAAAAATAGGAGAGTGCC
AAAATGCTCAAGGAAATAAAACAAGACTTGAATCATCTTATTTGCCTTCTATTAAAGAACCAGAAAGGAA
AATAAAAGAGCTGTTTTCAGTGATGCAAGATCAACCAAATCATGAAAAAGAATTGAACAAGATAAGAAGC
CAACTCCAACAGGTGGAAGAGTACCATAACTCTGAGCAGGAAAGAATGAGGAATGAAATCTCTGACCTAA
CAGAAGAGCTTCATCAGAAGGAGATCACTATAGCAACTGTCACAAAGAAAGCTGCCCTTCTGGAAAAACA
GTTAAAAATGGAATTAGAAATAAAAGAAAAAATGTTAGCAAAACAAAAGGTCTCAGATATGAAATATAAA
GCTGTCAGAACTGAAAACACACATCTAAAAGGAATGATGGGAGATTTAGACCCCGGAGAATACATGAGTA
TGGACTTCACTAACAGGGAACAGTCAAGGCATACATCTATTAATAAACTGCAATATGAGAATGAAAGGCT
CCGAAATGATCTTGCAAAACTTCATGTCAATGGAAAATCAACCTGGACTAATCAAAACACCTATGAAGAA
ACAGGAAGATATGCCTATCAAAGCCAAATAAAAGTGGAACAAAATGAAGAGAGACTTAGTCATGACTGTG
AGCCAAACAGAAGTACAATGCCTCCCTTGCCACCTTCGACATTTCAAGCCAAAGAAATGACAAGTCCTTT
GGTTAGTGATGATGATGTATTCCCACTGTCTCCCCCAGATATGTCCTTCCCAGCATCTTTGGCTGCACAG
CATTTCCTTCTGGAAGAAGAGAAACGAGCAAAAGAACTTGAAAAACTTCTAAATACACATATTGATGAAC
TGCAAAGACACACAGAATTTACTCTTAATAAATACTCCAAGCTAAAACAAAATAGACACATATGA

Translation (604 aa):
MENQAHNTMGTSPCEAELQELMEQIDIMVSNKKMDWERKMRALETRLDLRDQELANAQTCLDQKGQEVGL
LRQKLDSLEKCNLAMTQNYEGQLQSLKAQFSKLTNNFEKLRLHQMKQNKVPRKELPHLKEEIPFELSNLN
QKLEEFRAKSREWDKQEILYQTHLISLDAQQKLLSEKCNQFQKQAQSYQTQLNGKKQCLEDSSSEIPRLI
CDPDPNCEINERDEFIIEKLKSAVNEIALSRNKLQDENQKLLQELKMYQRQCQAMEAGLSEVKSELQSRD
DLLRIIEMERLQLHRELLKIGECQNAQGNKTRLESSYLPSIKEPERKIKELFSVMQDQPNHEKELNKIRS
QLQQVEEYHNSEQERMRNEISDLTEELHQKEITIATVTKKAALLEKQLKMELEIKEKMLAKQKVSDMKYK
AVRTENTHLKGMMGDLDPGEYMSMDFTNREQSRHTSINKLQYENERLRNDLAKLHVNGKSTWTNQNTYEE
TGRYAYQSQIKVEQNEERLSHDCEPNRSTMPPLPPSTFQAKEMTSPLVSDDDVFPLSPPDMSFPASLAAQ
HFLLEEEKRAKELEKLLNTHIDELQRHTEFTLNKYSKLKQNRHI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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