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Report for CCDS35075.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35075.1 Public Homo sapiens 9 ZNF782 24 110 108 CCDS HistoryNCBI Gene:158431Re-query CCDS DB by CCDS ID:35075.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35075.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000481138.6 ENSP00000419397.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000481138.6Link to Ensembl Protein Viewer:ENSP00000419397.1Re-query CCDS DB by Nucleotide ID:ENST00000481138Re-query CCDS DB by Protein ID:ENSP00000419397
Original member Current member EBI ENST00000535338.5 ENSP00000440624.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535338.5Link to Ensembl Protein Viewer:ENSP00000440624.2Re-query CCDS DB by Nucleotide ID:ENST00000535338Re-query CCDS DB by Protein ID:ENSP00000440624
Original member Current member NCBI NM_001001662.3 NP_001001662.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001662.3Link to Protein Sequence:NP_001001662.1Re-query CCDS DB by Nucleotide ID:NM_001001662Re-query CCDS DB by Protein ID:NP_001001662Link to BLAST:NP_001001662.1
Original member Current member NCBI NM_001346991.2 NP_001333920.1 Accepted alive Link to Nucleotide Sequence:NM_001346991.2Link to Protein Sequence:NP_001333920.1Re-query CCDS DB by Nucleotide ID:NM_001346991Re-query CCDS DB by Protein ID:NP_001333920Link to BLAST:NP_001333920.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001662.1 699 Q6ZMW2 699 100% 0 0
NP_001333920.1 699 Q6ZMW2 699 100% 0 0

Chromosomal Locations for CCDS 35075.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 96817923 96819778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 96827080 96827181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 96844890 96845016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 96851947 96851961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2100 nt):
ATGAACACATTTCAGGCATCAGTGTCATTCCAGGACGTGACTGTGGAATTCAGCCAGGAGGAGTGGCAGC
ACATGGGCCCTGTTGAGAGGACCCTGTACAGAGATGTGATGCTGGAGAACTACAGCCACCTCGTCTCAGT
GGGCTACTGCTTTACAAAACCAGAACTGATCTTCACATTGGAACAAGGAGAAGATCCATGGTTATTAGAG
AAAGAGAAAGGATTTCTAAGCAGGAACTCCCCAGAAGACTCCCAACCTGATGAAATCTCAGAGAAGAGCC
CAGAAAATCAAGGCAAACATTTGTTGCAAGTTTTATTCACCAATAAATTATTGACTACAGAGCAAGAAAT
TTCAGGAAAACCACATAATCGAGACATAAACATTTTTCGTGCAAGAATGATGCCTTGTAAATGTGACATT
GCGGGGTCTGCTTGCCAGGGGCTCAGCCTGATGGCCCCACACTGTCAGTATTCAAAAGAAAAGGCTCATG
AGCGTAATGTTTGTGACAAATGGCTCATCAGTATTAAGGATGGCAGAACTAACACTCAAGAGAAATCTTT
CGCTTATAGTAAAATTGTGAAAACCCTCCATCATAAGGAGGAAGTTATTCAACATCAGACAATTCAGACT
CTGGGGCAAGATTTTGAATATAATGAAAGTAGAAAAGCTTTTCTTGAAAAGGCTGCCCTTGTTACATCTA
ACAGTACCCACCCAAAAGGAAAATCTTACAATTTCAATAAATTTGGGGAAAACAAATATGATAAATCAAC
CTTTATTATTCCTCAGAACATGAATCCAGAGAAGAGTCACTATGAGTTTAATGATACTGGAAATTGTTTC
TGTAGAATCACTCACAAAACTCTCACAGGAGGGAAATCCTTCAGCCAAAAGTCACACATTAGAGAACATC
ATAGAGTTCATATAGGGGTGAAACCCTTTGAATATGGAAAAAGTTTCAACCGTAATTCAACCCTCCCAGT
GCATCAGAGAACTCATGCAACAGATAAATACTCTGATTATCACCCATGTACAGAGACATTCAGCTACCAG
TCAACTTTCAGTGTACATCAGAAGGTTCACATAAGGGCAAAACCCTATGAGTATAATGAATGTGGGAAAT
CCTGCTCTATGAATTCACACTTGATTTGGCCTCAGAAAAGTCACACAGGGGAGAAACCCTATGAATGTCC
TGAGTGCGGGAAAGCCTTCAGTGAGAAGTCACGCCTAAGAAAACATCAGAGAACTCACACGGGAGAGAAA
CCATACAAATGTGATGGATGTGATAAAGCTTTCAGTGCAAAGTCAGGCCTAAGAATACACCAGAGAACCC
ACACAGGGGAGAAACCATTCGAATGTCATGAATGTGGGAAATCTTTTAACTATAAGTCAATCCTCATAGT
GCATCAGAGAACTCACACAGGGGAGAAACCTTTTGAATGTAATGAATGCGGGAAATCTTTCAGCCATATG
TCAGGCCTAAGGAATCACCGAAGAACTCACACAGGGGAAAGACCATATAAATGTGATGAATGTGGGAAAG
CTTTCAAACTGAAGTCAGGCCTGAGGAAACATCATAGAACACACACAGGGGAGAAGCCCTACAAATGTAA
TCAGTGTGGAAAAGCTTTCGGTCAGAAATCACAACTCAGAGGACATCATAGAATTCACACAGGGGAAAAA
CCCTATAAATGTAATCATTGTGGGGAAGCTTTCAGTCAGAAATCAAACCTCAGAGTACATCACAGAACTC
ATACTGGGGAGAAACCCTATCAATGTGAGGAGTGTGGAAAAACATTCAGGCAGAAATCAAATCTCAGAGG
GCATCAGAGAACTCACACTGGGGAGAAGCCCTATGAATGTAATGAATGTGGAAAAGCTTTCAGTGAGAAG
TCAGTCCTAAGAAAACATCAGCGAACTCACACCGGGGAGAAACCATATAATTGTAATCAGTGTGGGGAAG
CTTTCAGTCAGAAATCCAATCTCAGAGTACATCAGAGAACTCACACAGGGGAGAAACCCTATAAATGTGA
TAAATGTGGGAGAACTTTCAGTCAAAAATCAAGCCTTAGAGAACATCAGAAAGCCCACCCAGGGGATTAA

Translation (699 aa):
MNTFQASVSFQDVTVEFSQEEWQHMGPVERTLYRDVMLENYSHLVSVGYCFTKPELIFTLEQGEDPWLLE
KEKGFLSRNSPEDSQPDEISEKSPENQGKHLLQVLFTNKLLTTEQEISGKPHNRDINIFRARMMPCKCDI
AGSACQGLSLMAPHCQYSKEKAHERNVCDKWLISIKDGRTNTQEKSFAYSKIVKTLHHKEEVIQHQTIQT
LGQDFEYNESRKAFLEKAALVTSNSTHPKGKSYNFNKFGENKYDKSTFIIPQNMNPEKSHYEFNDTGNCF
CRITHKTLTGGKSFSQKSHIREHHRVHIGVKPFEYGKSFNRNSTLPVHQRTHATDKYSDYHPCTETFSYQ
STFSVHQKVHIRAKPYEYNECGKSCSMNSHLIWPQKSHTGEKPYECPECGKAFSEKSRLRKHQRTHTGEK
PYKCDGCDKAFSAKSGLRIHQRTHTGEKPFECHECGKSFNYKSILIVHQRTHTGEKPFECNECGKSFSHM
SGLRNHRRTHTGERPYKCDECGKAFKLKSGLRKHHRTHTGEKPYKCNQCGKAFGQKSQLRGHHRIHTGEK
PYKCNHCGEAFSQKSNLRVHHRTHTGEKPYQCEECGKTFRQKSNLRGHQRTHTGEKPYECNECGKAFSEK
SVLRKHQRTHTGEKPYNCNQCGEAFSQKSNLRVHQRTHTGEKPYKCDKCGRTFSQKSSLREHQKAHPGD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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