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Report for CCDS29945.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29945.1 Public Mus musculus 19 Grk5 23 108 98 CCDS HistoryNCBI Gene:14773Re-query CCDS DB by CCDS ID:29945.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29945.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000003313.9 ENSMUSP00000003313.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000003313.9Link to Ensembl Protein Viewer:ENSMUSP00000003313.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000003313Re-query CCDS DB by Protein ID:ENSMUSP00000003313
Original member Current member NCBI NM_018869.3 NP_061357.3 Accepted alive Link to Nucleotide Sequence:NM_018869.3Link to Protein Sequence:NP_061357.3Re-query CCDS DB by Nucleotide ID:NM_018869Re-query CCDS DB by Protein ID:NP_061357Link to BLAST:NP_061357.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061357.3 590 Q8VEB1 590 100% 0 0

Chromosomal Locations for CCDS 29945.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 60890580 60890631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 60987702 60987797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 61031752 61031864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 61046077 61046154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 61068548 61068648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 61069304 61069396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 61072434 61072497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 61073389 61073529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 61076638 61076828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 61079337 61079374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 61080854 61080943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 61083061 61083269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 61086072 61086209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 61089911 61090048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 61090508 61090639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 61091894 61091992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1773 nt):
ATGGAGCTGGAAAACATCGTGGCCAACACGGTCTTGCTGAAAGCCCGGGAAGGGGGTGGAGGAAAGCGCA
AAGGGAAAAGCAAGAAGTGGAAGGAAATCCTGAAGTTTCCTCACATCAGCCAGTGTGAAGACCTCCGAAG
GACCATAGACAGAGATTACTACAGTCTATGTGACAAGCAACCAATTGGGAGACTGCTTTTTCGACAGTTC
TGTGAAACCAGGCCTGGGCTGGAGTGCTACATTCAGTTCCTGGACTTAGTGGCAGAATATGAAATTACTC
CAGATGAAAACCTTGGGGCGAAGGGGAAGGAAATAATGACCAAGTACCTCACTCCAAAGTCCCCAGTCTT
CATTGCCCAAGTTGGACAGGACCTGGTCTCCCAGACAGAGAAGAAGCTCCTGCAGAGCCCCTGCAAAGAA
CTCTTCTCTGCTTGTGCTCAGTCTGTCCATGACTACTTGAAGGGAGACCCCTTCCACGAGTACCTGGATA
GCATGTATTTTGACCGTTTTCTGCAGTGGAAATGGTTAGAAAGACAACCAGTGACCAAAAACACTTTCCG
GCAGTACCGAGTGCTGGGCAAAGGGGGCTTTGGAGAGGTCTGTGCCTGCCAGGTTCGGGCCACTGGTAAA
ATGTATGCTTGTAAACGCTTAGAGAAGAAGAGGATCAAAAAGAGGAAAGGCGAATCCATGGCACTCAACG
AAAAGCAGATTCTTGAGAAGGTCAACAGCCAGTTTGTGGTCAACCTGGCCTATGCCTATGAAACCAAAGA
TGCACTATGCCTGGTTCTGACCATTATGAATGGTGGTGACCTGAAGTTTCACATCTACAATATGGGGAAT
CCTGGCTTTGAGGAAGAGCGAGCCTTATTTTATGCAGCTGAGATCCTCTGTGGCCTAGAAGACTTACACC
GTGAGAACACTGTCTATAGAGATCTAAAACCCGAAAACATCTTGCTGGATGATTATGGCCACATAAGGAT
CTCAGACCTCGGACTGGCCGTGAAGATCCCCGAGGGAGACCTTATCCGTGGCCGGGTAGGCACTGTTGGC
TACATGGCCCCAGAAGTTCTGAACAACCAGCGATATGGACTGAGCCCTGACTACTGGGGCCTGGGCTGCC
TCATCTATGAGATGATTGAAGGCCAGTCACCATTTCGAGGTCGCAAGGAGAAGGTTAAGCGGGAAGAGGT
GGATCGCCGGGTGCTGGAGACTGAGGAAGTGTATTCCTCCAAGTTCTCTGAAGAGGCCAAGTCCATCTGC
AACATGCTGCTCACCAAAGACTCGAAGCAGAGGCTGGGCTGCCAGGAGGAGGGGGCCGCCGAGGTCAAGA
GGCACCCTTTCTTCAGGAACATGAACTTTAAGCGCCTGGAGGCTGGGATGTTGGACCCTCCCTTCGTTCC
AGATCCCCGGGCTGTATACTGCAAGGATGTGCTGGACATTGAGCAGTTCTCCACTGTGAAAGGTGTCAAC
CTGGACCATACGGACGATGATTTTTACTCAAAGTTCTCTACAGGCTCTGTGCCAATTCCATGGCAAAATG
AGATGATAGAAACAGAATGTTTCAAGGAGCTGAATGTGTTCGGACCTAACGGTACCCTCTCACCAGACCT
GAACAGAAGTCAGCCTCCAGAACCGCCAAAGAAAGGGCTGTTCCACAGACTCTTCAGGCGTCAGCATCAA
AGCAATTCCAAGAGTTCACCTACTCCTAAGACCAGTTGTAACCACCGAATAAATTCAAACCACATCAATT
CAAACTCCACTGGAAGCAGCTAG

Translation (590 aa):
MELENIVANTVLLKAREGGGGKRKGKSKKWKEILKFPHISQCEDLRRTIDRDYYSLCDKQPIGRLLFRQF
CETRPGLECYIQFLDLVAEYEITPDENLGAKGKEIMTKYLTPKSPVFIAQVGQDLVSQTEKKLLQSPCKE
LFSACAQSVHDYLKGDPFHEYLDSMYFDRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGK
MYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGN
PGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGDLIRGRVGTVG
YMAPEVLNNQRYGLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSSKFSEEAKSIC
NMLLTKDSKQRLGCQEEGAAEVKRHPFFRNMNFKRLEAGMLDPPFVPDPRAVYCKDVLDIEQFSTVKGVN
LDHTDDDFYSKFSTGSVPIPWQNEMIETECFKELNVFGPNGTLSPDLNRSQPPEPPKKGLFHRLFRRQHQ
SNSKSSPTPKTSCNHRINSNHINSNSTGSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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