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Report for CCDS21036.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21036.1 Public Mus musculus 7 Fbl 23 108 98 CCDS HistoryNCBI Gene:14113Re-query CCDS DB by CCDS ID:21036.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21036.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000042405.7 ENSMUSP00000037613.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000042405.7Link to Ensembl Protein Viewer:ENSMUSP00000037613.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000042405Re-query CCDS DB by Protein ID:ENSMUSP00000037613
Original member NCBI NM_007991.3 NP_032017.2 Updated not alive Link to Nucleotide Sequence:NM_007991.3Link to Protein Sequence:NP_032017.2Re-query CCDS DB by Nucleotide ID:NM_007991Re-query CCDS DB by Protein ID:NP_032017
Current member NCBI NM_007991.4 NP_032017.2 Accepted alive Link to Nucleotide Sequence:NM_007991.4Link to Protein Sequence:NP_032017.2Re-query CCDS DB by Nucleotide ID:NM_007991Re-query CCDS DB by Protein ID:NP_032017Link to BLAST:NP_032017.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032017.2 327 P35550 327 100% 0 0

Chromosomal Locations for CCDS 21036.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 28169809 28169818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28174504 28174686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28174785 28174892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28174984 28175078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28175855 28176025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28177143 28177275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28178205 28178317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28178898 28179043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28179131 28179155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (984 nt):
ATGAAGCCAGGTTTCAGCCCCCGTGGGGGTGGCTTTGGTGGCAGAGGCGGCTTTGGTGACAGAGGCGGTA
GAGGAGGTGGAAGAGGAGGCCGAGGAGGCTTTGGCGGTGGACGAGGAGGCTTTGGCGGTGGAGGTCGAGG
TCGAGGCGGAGGGGGTGGTGGCTTCAGGGGACGAGGAGGTGGCGGTGGCCGAGGTGGGGGCTTCCAGTCT
GGGGGCAACCGGGGTCGAGGTGGTGGCCGGGGAGGCAAGAGAGGAAACCAGTCAGGGAAGAATGTGATGG
TGGAGCCGCATCGTCATGAAGGTGTCTTTATCTGTCGCGGAAAGGAGGATGCCCTTGTCACAAAGAATCT
GGTCCCTGGAGAGTCTGTGTATGGAGAGAAGAGAGTCTCTATTTCAGAAGGAGATGACAAAATTGAGTAC
AGAGCCTGGAACCCCTTCCGCTCCAAGCTGGCAGCAGCTATCCTGGGCGGCGTAGACCAGATCCACATCA
AGCCAGGAGCCAAGGTGCTCTACCTTGGGGCAGCCTCAGGCACCACCGTCTCCCACGTCTCTGATATTGT
CGGCCCGGATGGTCTGGTCTACGCAGTTGAGTTCTCCCACCGCTCTGGCCGTGACCTCATCAACTTGGCC
AAGAAGAGGACTAACATTATTCCTGTAATTGAAGATGCTCGACACCCACACAAATACCGCATGCTTATCG
CAATGGTGGATGTCATCTTTGCCGATGTGGCCCAGCCAGACCAAACCCGAATTGTGGCCCTGAACGCCCA
CACCTTCCTGCGGAATGGAGGACACTTTGTGATTTCCATTAAGGCCAACTGCATTGACTCCACTGCGTCA
GCAGAGGCTGTGTTTGCATCTGAAGTGAAGAAGATGCAGCAGGAGAACATGAAGCCGCAGGAGCAGCTGA
CGCTAGAGCCTTATGAGCGAGACCACGCCGTGGTTGTCGGTGTGTACAGGCCACCTCCCAAGGTGAAGAA
CTGA

Translation (327 aa):
MKPGFSPRGGGFGGRGGFGDRGGRGGGRGGRGGFGGGRGGFGGGGRGRGGGGGGFRGRGGGGGRGGGFQS
GGNRGRGGGRGGKRGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEY
RAWNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLA
KKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTAS
AEAVFASEVKKMQQENMKPQEQLTLEPYERDHAVVVGVYRPPPKVKN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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