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Report for CCDS6354.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6354.1 Public Homo sapiens 8 ZNF572 24 110 108 CCDS HistoryNCBI Gene:137209Re-query CCDS DB by CCDS ID:6354.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6354.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319286.6 ENSP00000319305.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000319286.6Link to Ensembl Protein Viewer:ENSP00000319305.5Re-query CCDS DB by Nucleotide ID:ENST00000319286Re-query CCDS DB by Protein ID:ENSP00000319305
Original member Current member NCBI NM_152412.3 NP_689625.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152412.3Link to Protein Sequence:NP_689625.2Re-query CCDS DB by Nucleotide ID:NM_152412Re-query CCDS DB by Protein ID:NP_689625Link to BLAST:NP_689625.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689625.2 529 Q7Z3I7 529 100% 0 0

Chromosomal Locations for CCDS 6354.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 124975641 124975719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124976348 124977858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1590 nt):
ATGGAGCAAGAAAAAAAACTGTTGGTCTCAGATTCTAACAGCTTTATGGAGAGGGAGAGTTTGAAAAGCC
CTTTCACAGGAGATACAAGTATGAATAATTTGGAAACTGTTCACCACAATAATTCTAAGGCAGATAAACT
TAAAGAGAAACCTTCAGAATGGTCTAAAAGACATAGACCACAACATTATAAGCATGAGGATGCAAAAGAA
ATGCCACTGACATGGGTTCAAGATGAGATTTGGTGTCATGATTCCTATGAGAGTGATGGCAAGTCAGAGA
ATTGGGGAAATTTTATAGCTAAAGAGGAGGAAAAACCCAATCACCAGGAATGGGACTCAGGAGAACATAC
CAATGCCTGTGTCCAGCAGAATTCATCCTTTGTAGACAGACCCTATAAATGTTCCGAATGTTGGAAAAGC
TTCAGTAATAGTTCTCATTTGCGTACTCACCAGAGGACCCACTCAGGAGAAAAGCCTTATAAATGCTCTG
AGTGTGCAAAATGTTTTTGTAACAGTTCTCACCTGATTCAGCATCTAAGAATGCACACAGGAGAGAAGCC
CTACCAGTGTGGTGAATGTGGGAAAAGCTTCAGCAATACCTCCCATCTTATTATCCATGAGAGAACTCAC
ACGGGAGAGAAACCCTACAAATGTCCCGAGTGTGGGAAGAGATTCAGCAGCAGCTCTCACCTTATTCAGC
ATCACAGATCACATACAGGTGAAAAACCATATGAATGTTCTGTCTGCGGAAAAGGCTTCAGTCACAGCTA
TGTCCTAATAGAACATCAGAGGACTCACACTGGAGAAAAACCTTATAAGTGCCCTGATTGTGGGAAGAGT
TTTAGTCAGAGTTCCAGCCTCATTCGCCACCAGCGGACACACACAGGTGAGAAGCCCTACAAATGTCTTG
AGTGTGAAAAAAGCTTTGGTTGTAATTCTACTCTAATAAAACATCAGAGAATACATACAGGAGAAAAGCC
TTATCAATGTCCAGAATGTGGGAAGAATTTTAGTCGTAGTTCAAACCTTATTACACACCAGAAAATGCAC
ACAGGAGAGAAATCCTATGAAAGTTCTGAATATGAGGAAAGTTTGGGTCAGAACTGCAATGTGATAGAAG
AATGCAGAATCCAGTTAGGAGAGAAACCATATAGATGTTGTGAATGTGGGAAGAGTTTTGGCCTTAGCTC
CCATCTCATTAGACATCAGAGAACACATACAGGAGAAAAACCTTACAGATGTTCTGAGTGCTGGAAAACT
TTCAGTCAGAGTTCCACCCTGGTGATTCACCAAAGGACACATACAGGAGAGAAACCTTATAAATGTCCTG
ATTGTGGTGAAAGCTTCAGTCAGAGCTTTAACCTTATCAGGCACCGGAGGACCCACATAGGGGAAAAACC
TTACAAATGTACCAGCTGTGAGAAATGCTTCAGCAGAAGTGCCTACCTCAGTCAGCATCGGAAAATTCAC
GTAGAAAAGCCTTTTGAGTCTCCCGACGTTGGGGATTTTCCTCATGAATGGACTTGGAAAAACTGTTCAG
GGGAAATGCCCTTCATCTCTTCATTTTCCGTCTCAAATTCATCTTCCTGA

Translation (529 aa):
MEQEKKLLVSDSNSFMERESLKSPFTGDTSMNNLETVHHNNSKADKLKEKPSEWSKRHRPQHYKHEDAKE
MPLTWVQDEIWCHDSYESDGKSENWGNFIAKEEEKPNHQEWDSGEHTNACVQQNSSFVDRPYKCSECWKS
FSNSSHLRTHQRTHSGEKPYKCSECAKCFCNSSHLIQHLRMHTGEKPYQCGECGKSFSNTSHLIIHERTH
TGEKPYKCPECGKRFSSSSHLIQHHRSHTGEKPYECSVCGKGFSHSYVLIEHQRTHTGEKPYKCPDCGKS
FSQSSSLIRHQRTHTGEKPYKCLECEKSFGCNSTLIKHQRIHTGEKPYQCPECGKNFSRSSNLITHQKMH
TGEKSYESSEYEESLGQNCNVIEECRIQLGEKPYRCCECGKSFGLSSHLIRHQRTHTGEKPYRCSECWKT
FSQSSTLVIHQRTHTGEKPYKCPDCGESFSQSFNLIRHRRTHIGEKPYKCTSCEKCFSRSAYLSQHRKIH
VEKPFESPDVGDFPHEWTWKNCSGEMPFISSFSVSNSSS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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