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Report for CCDS4055.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4055.1 Public Homo sapiens 5 ACOT12 24 110 108 CCDS HistoryNCBI Gene:134526Re-query CCDS DB by CCDS ID:4055.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4055.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307624.8 ENSP00000303246.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307624.8Link to Ensembl Protein Viewer:ENSP00000303246.3Re-query CCDS DB by Nucleotide ID:ENST00000307624Re-query CCDS DB by Protein ID:ENSP00000303246
Original member Current member NCBI NM_130767.3 NP_570123.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_130767.3Link to Protein Sequence:NP_570123.1Re-query CCDS DB by Nucleotide ID:NM_130767Re-query CCDS DB by Protein ID:NP_570123Link to BLAST:NP_570123.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_570123.1 555 Q8WYK0-1 555 100% 0 0

Chromosomal Locations for CCDS 4055.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 81330394 81330543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81330814 81330940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81332477 81332605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81335768 81335901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81342672 81342755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81343818 81343881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81344160 81344215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81344891 81345041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81345885 81346004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81347774 81347930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81359903 81360038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81363788 81363889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81371750 81371810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81385757 81385826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 81393988 81394114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1668 nt):
ATGGAGCGGCCGGCGCCCGGCGAGGTGGTCATGAGCCAAGCCATCCAGCCGGCGCACGCCACTGCGCGCG
GCGAGCTGAGCGCGGGGCAGCTGCTCAAGTGGATCGACACCACCGCCTGCCTGGCGGCTGAGAAACATGC
TGGAGTTTCCTGCGTTACAGCCTCAGTGGATGACATACAGTTTGAGGAGACAGCTAGAGTTGGACAAGTT
ATAACCATCAAAGCAAAAGTTACTAGAGCATTCAGCACAAGCATGGAGATCAGTATCAAGGTCATGGTAC
AGGATATGCTCACTGGCATTGAGAAGCTTGTTAGTGTGGCTTTCTCCACATTTGTAGCCAAACCAGTTGG
AAAAGAAAAGATTCATTTAAAACCAGTCACACTTCTAACTGAACAAGATCATGTGGAACATAATCTGGCT
GCTGAGAGAAGGAAAGTTCGATTACAACATGAAGATACCTTTAACAATTTAATGAAGGAAAGTAGCAAAT
TTGATGATCTCATTTTTGATGAAGAGGAAGGAGCGGTTTCCACAAGGGGCACCTCCGTTCAGAGCATTGA
ACTGGTCCTCCCACCCCATGCAAACCATCACGGAAATACATTTGGTGGCCAGATTATGGCGTGGATGGAG
ACAGTGGCTACTATTTCTGCAAGCCGCCTGTGTTGGGCTCATCCCTTTCTGAAGTCCGTAGATATGTTTA
AGTTCCGGGGACCATCTACAGTTGGAGATCGTCTTGTCTTCACTGCCATTGTCAACAATACATTTCAGAC
CTGTGTTGAAGTTGGAGTTCGCGTGGAGGCCTTTGACTGTCAGGAATGGGCCGAGGGCCGAGGGCGTCAC
ATCAACAGTGCTTTTCTCATTTACAATGCTGCTGATGATAAGGAAAATCTCATCACGTTTCCCAGAATCC
AACCCATTTCAAAGGATGATTTCAGACGCTATCGGGGAGCTATTGCACGCAAGCGAATTCGCCTAGGCAG
AAAATATGTTATTTCCCACAAAGAAGAGGTTCCACTTTGCATACACTGGGATATCAGCAAGCAGGCATCC
CTGAGTGACAGCAATGTGGAGGCCCTCAAAAAACTGGCAGCCAAAAGGGGTTGGGAGGTTACCAGCACTG
TGGAAAAGATAAAAATATATACTCTGGAAGAGCATGATGTTTTATCTGTTTGGGTTGAAAAGCACGTGGG
AAGTCCAGCACATTTGGCTTATCGTCTCTTGTCTGACTTTACAAAGCGACCTTTGTGGGACCCCCATTTT
GTGTCCTGTGAAGTCATAGACTGGGTGAGTGAAGATGATCAGCTGTATCACATCACCTGTCCTATACTGA
ATGATGACAAACCCAAAGACTTGGTAGTACTCGTATCACGAAGAAAACCCCTCAAAGATGGTAACACTTA
CACAGTGGCAGTGAAGTCGGTCATTTTGCCATCGGTCCCCCCGTCTCCACAGTACATCAGAAGTGAAATC
ATATGTGCCGGATTTCTCATCCATGCTATTGACAGCAATTCATGCATCGTATCTTACTTTAACCATATGT
CTGCTAGCATCCTTCCTTACTTTGCTGGAAATCTTGGTGGCTGGTCAAAATCCATTGAAGAAACAGCAGC
CTCTTGTATACAGTTCTTAGAGAATCCTCCTGATGATGGGTTTGTAAGCACATTTTAA

Translation (555 aa):
MERPAPGEVVMSQAIQPAHATARGELSAGQLLKWIDTTACLAAEKHAGVSCVTASVDDIQFEETARVGQV
ITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEKIHLKPVTLLTEQDHVEHNLA
AERRKVRLQHEDTFNNLMKESSKFDDLIFDEEEGAVSTRGTSVQSIELVLPPHANHHGNTFGGQIMAWME
TVATISASRLCWAHPFLKSVDMFKFRGPSTVGDRLVFTAIVNNTFQTCVEVGVRVEAFDCQEWAEGRGRH
INSAFLIYNAADDKENLITFPRIQPISKDDFRRYRGAIARKRIRLGRKYVISHKEEVPLCIHWDISKQAS
LSDSNVEALKKLAAKRGWEVTSTVEKIKIYTLEEHDVLSVWVEKHVGSPAHLAYRLLSDFTKRPLWDPHF
VSCEVIDWVSEDDQLYHITCPILNDDKPKDLVVLVSRRKPLKDGNTYTVAVKSVILPSVPPSPQYIRSEI
ICAGFLIHAIDSNSCIVSYFNHMSASILPYFAGNLGGWSKSIEETAASCIQFLENPPDDGFVSTF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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