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Report for CCDS35789.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35789.1 Public Mus musculus 1 Ackr1 23 108 98 CCDS HistoryNCBI Gene:13349Re-query CCDS DB by CCDS ID:35789.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35789.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038227.5 ENSMUSP00000045134.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038227.5Link to Ensembl Protein Viewer:ENSMUSP00000045134.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000038227Re-query CCDS DB by Protein ID:ENSMUSP00000045134
Original member NCBI NM_010045.2 NP_034175.2 Updated not alive Link to Nucleotide Sequence:NM_010045.2Link to Protein Sequence:NP_034175.2Re-query CCDS DB by Nucleotide ID:NM_010045Re-query CCDS DB by Protein ID:NP_034175
Current member NCBI NM_010045.3 NP_034175.2 Accepted alive Link to Nucleotide Sequence:NM_010045.3Link to Protein Sequence:NP_034175.2Re-query CCDS DB by Nucleotide ID:NM_010045Re-query CCDS DB by Protein ID:NP_034175Link to BLAST:NP_034175.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034175.2 334 Q9QUI6 334 97.3054% 0 9

Chromosomal Locations for CCDS 35789.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 173331946 173332929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 173333390 173333410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1005 nt):
ATGGGGAACTGTCTGTATCCGGTGGAAAACCTTTCACTAGACAAGAATGGAACTCAGTTTACTTTCGACA
GCTGGAATTATTCGTTTGAAGATAACTACTCCTATGAACTCTCGAGTGACTACAGCCTGACACCAGCTGC
TCCCTGCTACTCCTGTAATCTGCTTGGCAGGTCTTCCCTTCCCTTCTTCATGCTCACCAGTGTCCTGGGC
ATGCTGGCAAGTGGCGGCATCCTCTTCGCGATTCTCAGACCTTTCTTCCACTGGCAGATTTGCCCCAGCT
GGCCCATTCTGGCAGAGTTAGCAGTGGGCAGTGCCCTGTTCAGCATTGCAGTGCCCATCCTGGCACCAGG
CTTACACAGCGCCCACAGCACAGCCCTATGCAACCTGGGCTACTGGGTATGGTATACTTCTGCTTTTGCC
CAAGCTCTGTTGATAGGATGCTATGCTTGCCTGAACCCCAGACTGAATATTGGTCAACTCCGTGGCTTCA
CCTTGGGACTCAGTGTGGGACTTTGGGGAGCAGCTGCCCTCTTAGGGCTGCCAGTCGCCCTGGCCAGTGA
TGCTTACAATGGCTTCTGCGCCTTTCCATCCTCCAGAGACATGGAAGCTTTGAAGTACATGCATTATGCC
ATCTGTTTTACCATCTTCACTGTATTGCCACCGACTCTTTTGGCAGCCAAGGGGCTGAAGATAGCACTGA
GCAAGGGGCCTGGCCCCTGGGTTAGTGTCTTGTGGATCTGGTTCATTTTCTGGTGGCCTCATGGGATGGT
TCTCATATTTGATGCTTTGGTGAGGTCCAAAATTGTTCTTCTGTATACATGCCAATCCCAGAAGATTCTT
GATGCGATGCTGAATGTGACAGAAGCCCTGAGTATGCTGCACTGTGTGGCTACCCCACTGCTCCTGGCCC
TGTTCTGCCATCAGACCACCCGTAGATCCTTGTCCTCACTCTCCCTCCCTACAAGACAGGCTTCTCAAAT
GGATGCCCTTGCAGGCAAGTCCTAG

Translation (334 aa):
MGNCLYPVENLSLDKNGTQFTFDSWNYSFEDNYSYELSSDYSLTPAAPCYSCNLLGRSSLPFFMLTSVLG
MLASGGILFAILRPFFHWQICPSWPILAELAVGSALFSIAVPILAPGLHSAHSTALCNLGYWVWYTSAFA
QALLIGCYACLNPRLNIGQLRGFTLGLSVGLWGAAALLGLPVALASDAYNGFCAFPSSRDMEALKYMHYA
ICFTIFTVLPPTLLAAKGLKIALSKGPGPWVSVLWIWFIFWWPHGMVLIFDALVRSKIVLLYTCQSQKIL
DAMLNVTEALSMLHCVATPLLLALFCHQTTRRSLSSLSLPTRQASQMDALAGKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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