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Report for CCDS25454.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25454.1 Public Mus musculus 11 Ccr10 23 108 98 CCDS HistoryNCBI Gene:12777Re-query CCDS DB by CCDS ID:25454.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25454.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000062759.3 ENSMUSP00000062588.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000062759.3Link to Ensembl Protein Viewer:ENSMUSP00000062588.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000062759Re-query CCDS DB by Protein ID:ENSMUSP00000062588
Original member Current member NCBI NM_007721.4 NP_031747.2 Accepted alive Link to Nucleotide Sequence:NM_007721.4Link to Protein Sequence:NP_031747.2Re-query CCDS DB by Nucleotide ID:NM_007721Re-query CCDS DB by Protein ID:NP_031747Link to BLAST:NP_031747.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031747.2 362 Q9JL21 362 100% 0 0

Chromosomal Locations for CCDS 25454.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 101173614 101174678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101175400 101175423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1089 nt):
ATGGGGACCAAGCCCACAGAGCAGGTCTCCTGGGGACTTTACTCCGGGTACGATGAGGAGGCCTATTCGG
TTGGGCCGCTGCCAGAGCTCTGTTACAAGGCTGATGTCCAGGCTTTCAGTCGGGCCTTCCAACCCAGTGT
CTCCCTGATGGTGGCTGTACTGGGTCTGGCTGGCAATGGCCTAGTCTTGGCCACCCATCTGGCAGCCAGA
CGAACTACCCGATCTCCCACCTCCGTTCACCTGCTCCAGTTGGCCCTGGCTGACCTTTTATTGGCCCTGA
CTTTGCCTTTTGCTGCAGCAGGGGCTCTTCAGGGCTGGAATCTAGGAAGTACCACCTGCCGTGCCATCTC
AGGCCTCTACTCGGCCTCTTTCCACGCTGGCTTCCTCTTCCTAGCCTGTATCAGCGCCGACCGCTATGTG
GCCATCGCACGAGCTCTCCCAGCCGGGCAGCGGCCCTCAACGCCTAGCCGAGCGCACTTGGTTTCAGTCT
TCGTGTGGCTGTTGTCGCTGTTTCTGGCTCTACCTGCGCTCCTTTTCAGCCGGGACGGGCCACGTGAAGG
CCAACGACGCTGTCGGCTCATTTTTCCCGAAAGCCTCACGCAGACTGTGAAAGGGGCAAGCGCAGTGGCG
CAGGTGGTCCTCGGCTTCGCGCTCCCTCTGGGCGTCATGGCAGCCTGTTATGCGCTCCTGGGCCGCACGC
TTCTGGCCGCCAGGGGGCCAGAGCGGCGGCGTGCACTGCGCGTCGTGGTGGCTTTGGTGGTGGCCTTCGT
GGTGCTGCAGTTGCCCTACAGCCTTGCCCTGCTGCTGGATACAGCCGATCTACTGGCAGCCCGCGAGCGG
AGCTGCTCCTCCAGCAAGCGCAAGGATCTAGCTTTGCTGGTCACCGGCGGCTTGACCCTGGTCCGTTGCA
GCCTCAATCCGGTGCTTTATGCCTTTTTGGGCCTGCGTTTCCGCCGGGACCTGCGGAGGCTGCTCCAGGG
CGGAGGATGCAGCCCGAAGCCCAACCCTCGTGGCCGCTGCCCCCGTCGACTCCGCCTTTCTTCCTGCTCT
GCTCCTACTGAGACCCACAGTCTCTCTTGGGACAACTAG

Translation (362 aa):
MGTKPTEQVSWGLYSGYDEEAYSVGPLPELCYKADVQAFSRAFQPSVSLMVAVLGLAGNGLVLATHLAAR
RTTRSPTSVHLLQLALADLLLALTLPFAAAGALQGWNLGSTTCRAISGLYSASFHAGFLFLACISADRYV
AIARALPAGQRPSTPSRAHLVSVFVWLLSLFLALPALLFSRDGPREGQRRCRLIFPESLTQTVKGASAVA
QVVLGFALPLGVMAACYALLGRTLLAARGPERRRALRVVVALVVAFVVLQLPYSLALLLDTADLLAARER
SCSSSKRKDLALLVTGGLTLVRCSLNPVLYAFLGLRFRRDLRRLLQGGGCSPKPNPRGRCPRRLRLSSCS
APTETHSLSWDN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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