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Report for CCDS32029.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32029.1 Public Homo sapiens 14 OR4L1 24 110 108 CCDS HistoryNCBI Gene:122742Re-query CCDS DB by CCDS ID:32029.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 32029.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000315683.1 ENSP00000319217.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000315683.1Link to Ensembl Protein Viewer:ENSP00000319217.1Re-query CCDS DB by Nucleotide ID:ENST00000315683Re-query CCDS DB by Protein ID:ENSP00000319217
Original member Current member NCBI NM_001004717.1 NP_001004717.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004717.1Link to Protein Sequence:NP_001004717.1Re-query CCDS DB by Nucleotide ID:NM_001004717Re-query CCDS DB by Protein ID:NP_001004717Link to BLAST:NP_001004717.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004717.1 312 Q8NH43 312 100% 0 0

Chromosomal Locations for CCDS 32029.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 20060045 20060983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGATCTTAAAAATGGATCTCTAGTGACCGAGTTTATTTTACTAGGATTTTTTGGACGATGGGAACTTC
AAATTTTCTTCTTTGTGACATTTTCCCTGATCTACGGTGCTACTGTGATGGGAAACATTCTCATTATGGT
CACAGTGACATGTAGGTCAACCCTTCATTCTCCCTTGTACTTTCTCCTTGGAAATCTCTCTTTTTTGGAC
ATGTGTCTCTCCACTGCCACAACACCCAAGATGATCATAGATTTGCTCACTGACCACAAGACCATCTCTG
TGTGGGGCTGCGTGACCCAGATGTTCTTCATGCACTTCTTTGGGGGTGCTGAGATGACTCTTCTGATAAT
CATGGCCTTTGACAGGTATGTAGCCATATGTAAACCCCTGCACTATAGGACAATCATGAGCCACAAGCTG
CTAAAGGGGTTTGCGATACTTTCATGGATAATTGGTTTTTTACACTCCATAAGCCAGATAGTTTTAACAA
TGAACTTGCCTTTCTGTGGCCACAATGTCATAAACAACATATTTTGTGATCTTCCCCTTGTGATCAAGCT
TGCTTGCATTGAAACATACACCCTGGAATTATTTGTCATTGCTGACAGCGGGCTGCTCTCTTTCACCTGT
TTCATCCTCTTGCTTGTTTCTTACATTGTCATCCTGGTCAGTGTACCAAAAAAATCATCACATGGGCTCT
CCAAGGCGCTGTCCACATTGTCTGCCCACATCATTGTGGTCACTCTGTTCTTTGGACCTTGTATTTTTAT
CTATGTTTGGCCATTCAGTAGTTTGGCAAGCAATAAAACTCTTGCCGTATTTTATACAGTTATCACACCC
TTACTGAATCCGAGTATTTATACCCTGAGAAATAAGAAAATGCAAGAGGCCATAAGAAAATTACGGTTCC
AATATGTTAGTTCTGCACAGAATTTCTAG

Translation (312 aa):
MDLKNGSLVTEFILLGFFGRWELQIFFFVTFSLIYGATVMGNILIMVTVTCRSTLHSPLYFLLGNLSFLD
MCLSTATTPKMIIDLLTDHKTISVWGCVTQMFFMHFFGGAEMTLLIIMAFDRYVAICKPLHYRTIMSHKL
LKGFAILSWIIGFLHSISQIVLTMNLPFCGHNVINNIFCDLPLVIKLACIETYTLELFVIADSGLLSFTC
FILLLVSYIVILVSVPKKSSHGLSKALSTLSAHIIVVTLFFGPCIFIYVWPFSSLASNKTLAVFYTVITP
LLNPSIYTLRNKKMQEAIRKLRFQYVSSAQNF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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