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Report for CCDS30532.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30532.1 Public Mus musculus X Prps2 23 108 98 CCDS HistoryNCBI Gene:110639Re-query CCDS DB by CCDS ID:30532.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30532.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026839.4 ENSMUSP00000026839.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026839.4Link to Ensembl Protein Viewer:ENSMUSP00000026839.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000026839Re-query CCDS DB by Protein ID:ENSMUSP00000026839
Original member Current member NCBI NM_026662.5 NP_080938.1 Accepted alive Link to Nucleotide Sequence:NM_026662.5Link to Protein Sequence:NP_080938.1Re-query CCDS DB by Nucleotide ID:NM_026662Re-query CCDS DB by Protein ID:NP_080938Link to BLAST:NP_080938.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080938.1 318 Q9CS42 318 100% 0 0

Chromosomal Locations for CCDS 30532.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 167348906 167348998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 167350515 167350674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 167352136 167352309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 167363545 167363669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 167365119 167365217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 167374003 167374186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 167382470 167382591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (957 nt):
ATGCCTAACATCGTGCTCTTCAGCGGCAGTTCTCACCAGGACCTGTCGCAGCGCGTGGCCGATCGCCTGG
GCCTGGAGCTGGGCAAGGTGGTCACCAAGAAGTTTAGCAACCAGGAGACCAGTGTCGAGATCGGTGAAAG
TGTGAGAGGGGAAGATGTCTACATCATCCAGAGTGGCTGCGGGGAGATTAATGACAACCTGATGGAGCTA
CTCATCATGATCAATGCGTGCAAGATTGCGTCCTCATCCAGGGTGACAGCTGTGATACCCTGCTTCCCCT
ACGCCCGGCAAGATAAAAAGGACAAGAGTCGTGCTCCAATTTCTGCTAAACTTGTGGCCAATATGCTGTC
AGTTGCTGGGGCTGATCACATCATTACCATGGACCTGCATGCCTCTCAGATCCAGGGTTTCTTTGATATT
CCTGTGGATAATTTATATGCAGAACCTGCAGTTCTTCAGTGGATTCGGGAGAACATCACTGAATGGAGAA
ACTGTATTATTGTTTCTCCAGATGCTGGAGGAGCCAAAAGGGTTACATCAATTGCAGACAGACTGAATGT
GGAATTTGCTTTGATTCACAAAGAGAGAAAGAAAGCAAATGAAGTGGACCGGATGGTTCTCGTGGGTGAT
GTGAAGGACCGTGTGGCCATCCTGGTAGACGACATGGCCGATACATGTGGTACCATCTGCCATGCTGCAG
ATAAGTTACTCTCAGCTGGTGCCACCAAAGTTTATGCTATTCTTACCCATGGAATCTTCTCTGGGCCAGC
TATTTCCAGAATAAATAGTGCTGCCTTTGAAGCTGTTGTTGTCACCAACACAATTCCACAAGAGGACAAA
ATGAAACACTGCTCCAAAATTCAGGTGATTGACATTTCGATGATCCTGGCTGAAGCCATTCGAAGAACCC
ACAATGGGGAATCCGTGTCCTATCTGTTCAGCCATGTCCCACTGTAG

Translation (318 aa):
MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGCGEINDNLMEL
LIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDI
PVDNLYAEPAVLQWIRENITEWRNCIIVSPDAGGAKRVTSIADRLNVEFALIHKERKKANEVDRMVLVGD
VKDRVAILVDDMADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISRINSAAFEAVVVTNTIPQEDK
MKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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