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Report for CCDS57263.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57263.1 Public Mus musculus 4 Fsbp 23 108 98 CCDS HistoryNCBI Gene:100503583Re-query CCDS DB by CCDS ID:57263.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57263.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000180239.1 ENSMUSP00000137082.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000180239.1Link to Ensembl Protein Viewer:ENSMUSP00000137082.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000180239Re-query CCDS DB by Protein ID:ENSMUSP00000137082
Original member Current member NCBI NM_001256142.1 NP_001243071.1 Accepted alive Link to Nucleotide Sequence:NM_001256142.1Link to Protein Sequence:NP_001243071.1Re-query CCDS DB by Nucleotide ID:NM_001256142Re-query CCDS DB by Protein ID:NP_001243071Link to BLAST:NP_001243071.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243071.1 299 Q8BKE5-1 299 100% 0 0

Chromosomal Locations for CCDS 57263.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 11579734 11580107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 11583677 11584202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (900 nt):
ATGGTAGGAAAGGCTAGATCTTCCAATTTTACCTTATCTGAAAAGCTTGATTTGCTAAACCTTGTGAAGC
CATATGTGAAAATTCTCGAAGAGCACACTAATAAAAATTCAGTAATAGTGGAAAAGAATAGATGTTGGGA
TGTCATAGCAGTTAACTATAATGCGATTGGAGTAGACCGCCCTCCTCGCACAGCTCAGGGCCTACGCAGC
CTTTACAAAAGGCTCAAAGAATATGCCAAACAGGAGCTATTGCAGCAAAAGGAGGCCCAGTCTGAGTTTA
AAAGCAGTGTTTCGGAGCCCACCAAGCAAGTCATGGAAATGATTCCCCAGATTGCCAGCTTCGGCCTCAT
AAGAGACAGGAGCCACATACAGAGTGCAAACTTGGATGAGACTGCCCAAGCTGGTACCAGTTCGCTGCAG
GTAATGGTGGATCACCATCCTGTTGCTATCACTGTAGAGGTGAAGCAAGAAGAGGACATTAAGCCATCTC
CTCCCCTGGTTTCAAATCCTCAACTCAGTGATACTTTAGAGCAAAGAGAAGAACATGAGTTAATGCATGT
TGTGGAGGGATCCGAGTCTCCATCACTTTCTTCTGTTGATATGAGAATGACATCATCTCCATCTTCTGTC
CCAAGGAGAGATGAGATTTTTCATCAGGAAAGTGGAGAACACTTTAGGTCTCTGCTAAGATGTGACCCTC
AGGTCCTGCAAATGTTAAAAGAGGAACACCAGATAATTTTAGAAAATCAGAAGAATTTTGGATTGTATGT
TCAGGAGAAGAGGGATGGGTTGAGAAGAAGGCAGCGGCTTGAGGAGGAGCTGCTAAGAGCAAAGATTGAA
GTGGAGAAGCTGAAAGCGACTCGCTTACGGCGTGATCTGCCTGAATACAGTAGTCTCTGA

Translation (299 aa):
MVGKARSSNFTLSEKLDLLNLVKPYVKILEEHTNKNSVIVEKNRCWDVIAVNYNAIGVDRPPRTAQGLRS
LYKRLKEYAKQELLQQKEAQSEFKSSVSEPTKQVMEMIPQIASFGLIRDRSHIQSANLDETAQAGTSSLQ
VMVDHHPVAITVEVKQEEDIKPSPPLVSNPQLSDTLEQREEHELMHVVEGSESPSLSSVDMRMTSSPSSV
PRRDEIFHQESGEHFRSLLRCDPQVLQMLKEEHQIILENQKNFGLYVQEKRDGLRRRQRLEEELLRAKIE
VEKLKATRLRRDLPEYSSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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