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Report for CCDS9842.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9842.1 Public Homo sapiens 14 JDP2 24 110 108 CCDS HistoryNCBI Gene:122953Re-query CCDS DB by CCDS ID:9842.1Re-query CCDS DB by GeneID:122953See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9842.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000435893.6 ENSP00000399587.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000435893.6Link to Ensembl Protein Viewer:ENSP00000399587.2Re-query CCDS DB by Nucleotide ID:ENST00000435893Re-query CCDS DB by Protein ID:ENSP00000399587
Original member Current member EBI ENST00000437176.5 ENSP00000409787.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000437176.5Link to Ensembl Protein Viewer:ENSP00000409787.1Re-query CCDS DB by Nucleotide ID:ENST00000437176Re-query CCDS DB by Protein ID:ENSP00000409787
Original member Current member EBI ENST00000419727.6 ENSP00000415558.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000419727.6Link to Ensembl Protein Viewer:ENSP00000415558.2Re-query CCDS DB by Nucleotide ID:ENST00000419727Re-query CCDS DB by Protein ID:ENSP00000415558
Original member Current member EBI ENST00000651602.1 ENSP00000498745.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000651602.1Link to Ensembl Protein Viewer:ENSP00000498745.1Re-query CCDS DB by Nucleotide ID:ENST00000651602Re-query CCDS DB by Protein ID:ENSP00000498745
Original member Current member NCBI NM_001135047.2 NP_001128519.1 Accepted alive Link to Nucleotide Sequence:NM_001135047.2Link to Protein Sequence:NP_001128519.1Re-query CCDS DB by Nucleotide ID:NM_001135047Re-query CCDS DB by Protein ID:NP_001128519Link to BLAST:NP_001128519.1
Original member Current member NCBI NM_001135048.2 NP_001128520.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001135048.2Link to Protein Sequence:NP_001128520.1Re-query CCDS DB by Nucleotide ID:NM_001135048Re-query CCDS DB by Protein ID:NP_001128520Link to BLAST:NP_001128520.1
Original member Current member NCBI NM_130469.3 NP_569736.1 Accepted alive Link to Nucleotide Sequence:NM_130469.3Link to Protein Sequence:NP_569736.1Re-query CCDS DB by Nucleotide ID:NM_130469Re-query CCDS DB by Protein ID:NP_569736Link to BLAST:NP_569736.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128519.1 163 Q8WYK2-1 163 100% 0 0
NP_001128520.1 163 Q8WYK2-1 163 100% 0 0
NP_569736.1 163 Q8WYK2-1 163 100% 0 0

Chromosomal Locations for CCDS 9842.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 75437921 75438121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 75461426 75461530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 75469290 75469475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (492 nt):
ATGATGCCTGGGCAGATCCCGGACCCTTCGGTGACCACAGGCTCCCTGCCAGGGCTTGGCCCCCTGACCG
GGCTCCCCAGCTCGGCCCTGACTGTGGAGGAGCTGAAATACGCTGACATCCGCAACCTCGGGGCCATGAT
TGCACCCTTGCACTTCCTGGAGGTGAAACTGGGCAAGAGGCCCCAGCCCGTGAAAAGTGAGCTAGATGAG
GAAGAGGAGCGAAGGAAAAGGCGCCGGGAGAAGAACAAAGTCGCAGCAGCCCGATGCCGGAACAAGAAGA
AGGAGCGCACGGAGTTTCTGCAGCGGGAATCCGAGCGGCTGGAACTCATGAACGCAGAGCTGAAGACCCA
GATTGAGGAGCTGAAGCAGGAGCGGCAGCAGCTCATCCTGATGCTGAACCGACACCGCCCCACCTGCATC
GTCCGGACCGACAGTGTCAAGACCCCCGAGTCAGAAGGCAACCCACTGCTCGAGCAGCTCGAGAAGAAGT
GA

Translation (163 aa):
MMPGQIPDPSVTTGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAPLHFLEVKLGKRPQPVKSELDE
EEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEELKQERQQLILMLNRHRPTCI
VRTDSVKTPESEGNPLLEQLEKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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