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Report for CCDS9807.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9807.1 Public Homo sapiens 14 SIPA1L1 24 110 108 CCDS HistoryNCBI Gene:26037Re-query CCDS DB by CCDS ID:9807.1Re-query CCDS DB by GeneID:26037See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9807.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000555818.5 ENSP00000450832.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000555818.5Link to Ensembl Protein Viewer:ENSP00000450832.1Re-query CCDS DB by Nucleotide ID:ENST00000555818Re-query CCDS DB by Protein ID:ENSP00000450832
Original member Current member NCBI NM_001354285.2 NP_001341214.1 Accepted alive Link to Nucleotide Sequence:NM_001354285.2Link to Protein Sequence:NP_001341214.1Re-query CCDS DB by Nucleotide ID:NM_001354285Re-query CCDS DB by Protein ID:NP_001341214Link to BLAST:NP_001341214.1
Original member Current member NCBI NM_015556.4 NP_056371.1 Accepted alive Link to Nucleotide Sequence:NM_015556.4Link to Protein Sequence:NP_056371.1Re-query CCDS DB by Nucleotide ID:NM_015556Re-query CCDS DB by Protein ID:NP_056371Link to BLAST:NP_056371.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001341214.1 1804 O43166-1 1804 100% 0 0
NP_056371.1 1804 O43166-1 1804 100% 0 0

Chromosomal Locations for CCDS 9807.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 71587873 71589370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71618757 71618887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71624048 71624236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71650335 71650509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71658333 71658436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71661310 71661467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71671119 71671692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71672348 71672622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71685362 71685631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71698981 71699127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71702381 71702505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71704721 71704783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71705222 71705340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71709222 71709664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71723647 71723886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71724670 71724835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71730055 71730301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71733666 71733812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71735277 71735391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71738241 71738325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 71739018 71739161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5415 nt):
ATGACCAGCTTGAAACGGTCACAGACAGAAAGGCCTCTTGCCACTGACAGGGCCTCTGTTGTTGGCACAG
ACGGCACCCCCAAAGTCCACACTGATGATTTCTACATGCGGCGCTTCCGGTCCCAAAATGGCAGCTTAGG
ATCATCAGTTATGGCTCCTGTAGGACCCCCCCGAAGTGAAGGTTCTCACCATATAACCTCAACCCCCGGA
GTCCCAAAAATGGGGGTAAGGGCAAGGATTGCAGATTGGCCCCCAAGAAAGGAAAACATAAAAGAATCTA
GCCGTTCAAGCCAGGAAATAGAAACCTCAAGTTGCCTTGATAGCCTGTCCTCCAAAAGCAGTCCTGTGAG
TCAGGGAAGTTCTGTTAGCCTCAATTCCAATGACTCAGCCATGCTGAAAAGCATACAGAACACGCTGAAA
AACAAGACAAGACCGTCGGAGAACATGGACTCCAGATTTCTCATGCCTGAAGCCTACCCCAGCTCCCCCA
GAAAAGCTCTTCGCAGAATACGCCAGCGAAGCAACAGTGATATCACCATAAGTGAACTTGATGTGGATAG
CTTTGATGAATGTATCTCACCTACATACAAGACTGGACCATCACTGCACAGGGAATATGGTAGCACATCT
TCAATTGATAAACAGGGAACATCTGGAGAAAGCTTTTTTGATTTGTTAAAGGGCTACAAAGATGACAAAT
CTGATCGAGGTCCAACTCCAACCAAGCTCAGTGACTTTCTCATTACTGGTGGTGGCAAGGGTTCTGGTTT
CTCTTTGGATGTAATAGACGGGCCTATCTCACAGAGAGAGAACCTCAGGCTTTTTAAGGAAAGGGAAAAA
CCACTCAAGCGACGTTCAAAATCTGAAACTGGAGACTCATCTATTTTTCGTAAATTGCGCAATGCCAAAG
GTGAAGAACTTGGGAAGTCATCAGATCTTGAAGATAACCGATCAGAAGACTCTGTCAGGCCCTGGACATG
TCCAAAGTGCTTTGCCCACTATGATGTCCAGAGTATATTATTTGATTTGAATGAGGCAATTATGAACAGG
CACAATGTTATTAAGAGGAGAAACACCACCACTGGAGCTTCCGCAGCTGCCGTGGCATCCTTGGTCTCTG
GACCTCTGTCTCATTCAGCCAGTTTTAGCTCCCCAATGGGCAGCACAGAGGACCTGAATTCCAAAGGAAG
CCTCAGCATGGACCAGGGAGATGATAAAAGCAATGAGCTTGTAATGAGCTGTCCATATTTTCGGAATGAG
ATAGGTGGAGAAGGGGAGAGGAAAATCAGCCTTTCAAAATCAAATTCTGGCTCCTTTAGTGGATGTGAAA
GTGCCTCCTTTGAGTCTACCCTTAGTTCCCATTGCACAAATGCAGGAGTGGCAGTACTTGAAGTGCCCAA
GGAGAACTTGGTGTTGCACCTAGATAGAGTGAAAAGATACATCGTGGAACACGTAGATCTGGGTGCATAC
TATTATAGAAAATTTTTCTACCAGAAGGAACACTGGAACTATTTTGGGGCTGATGAGAATCTTGGTCCAG
TGGCTGTGAGCATTCGAAGGGAAAAACCAGATGAAATGAAAGAAAATGGATCTCCGTACAACTACCGAAT
AATTTTTAGAACTAGTGAGCTCATGACACTGAGAGGTTCGGTCCTGGAGGACGCCATTCCGTCGACAGCC
AAGCACTCGACAGCCAGAGGCCTGCCTCTCAAAGAAGTGCTGGAGCACGTGGTTCCTGAGCTCAATGTCC
AGTGCCTGCGGTTGGCCTTCAACACACCCAAGGTCACAGAGCAGCTCATGAAACTGGATGAACAAGGGCT
GAACTACCAGCAGAAAGTAGGCATCATGTACTGCAAAGCTGGACAGAGCACTGAAGAAGAGATGTACAAC
AATGAGTCAGCTGGCCCAGCCTTTGAAGAATTTCTTCAACTATTGGGAGAGCGAGTTCGGCTCAAAGGAT
TTGAGAAGTATCGAGCACAGCTTGATACCAAAACTGACTCCACTGGAACCCATTCTCTGTACACAACATA
CAAAGATTATGAAATTATGTTCCATGTTTCTACCATGCTGCCATACACACCCAACAACAAACAACAGCTC
CTGAGGAAGCGGCACATTGGAAATGATATCGTAACAATTGTTTTCCAAGAGCCTGGAGCACAGCCATTCA
GCCCAAAAAACATCCGATCCCACTTCCAGCACGTTTTCGTCATCGTCAGGGTGCACAATCCGTGCTCTGA
CAGTGTCTGTTATAGTGTGGCTGTTACCAGGTCCAGAGATGTGCCTTCCTTTGGGCCTCCCATTCCTAAA
GGGGTCACTTTCCCTAAGTCAAATGTGTTCAGGGACTTCCTTTTGGCGAAAGTGATTAATGCAGAAAATG
CTGCTCATAAATCGGAGAAGTTTCGGGCCATGGCAACTCGGACCCGCCAGGAATACCTGAAAGATCTGGC
AGAAAAGAATGTCACCAACACCCCTATCGACCCTTCTGGCAAGTTTCCGTTCATCTCTCTGGCTTCCAAG
AAGAAGGAAAAGTCTAAGCCATATCCAGGAGCCGAGCTCAGCAGCATGGGGGCCATTGTATGGGCAGTCC
GGGCTGAAGACTACAACAAGGCCATGGAACTAGACTGCCTTTTAGGGATCTCCAATGAGTTCATTGTGCT
CATTGAACAGGAAACAAAGAGCGTGGTCTTCAATTGTTCCTGTAGAGATGTGATAGGGTGGACTTCAACT
GACACCAGCCTCAAAATCTTCTATGAACGAGGAGAATGTGTTTCAGTGGGTAGTTTTATTAACATTGAGG
AGATCAAAGAGATTGTCAAAAGGTTGCAGTTTGTTTCAAAAGGCTGTGAATCGGTGGAGATGACTCTGCG
AAGAAATGGGCTAGGACAGCTTGGCTTCCATGTCAACTATGAGGGCATTGTGGCGGATGTGGAGCCCTAC
GGTTATGCCTGGCAGGCAGGGCTGAGGCAGGGCAGTCGCCTGGTGGAGATCTGCAAGGTGGCGGTAGCCA
CTCTGAGCCATGAGCAGATGATCGACCTCCTGAGAACATCTGTCACGGTGAAGGTTGTCATCATTCCCCC
GCATGATGACTGCACCCCGCGGAGGAGTTGCTCTGAAACCTACCGCATGCCAGTGATGGAGTACAAAATG
AATGAAGGTGTTTCATACGAATTCAAGTTTCCCTTCCGAAATAATAACAAGTGGCAGAGGAACGCCAGCA
AGGGGCCTCATTCACCTCAAGTCCCGTCCCAGGTGCAGAGTCCCATGACCTCGCGGCTGAATGCTGGAAA
AGGAGATGGGAAGATGCCTCCTCCAGAAAGAGCCGCCAACATCCCTCGAAGCATCTCCAGTGACGGGCGC
CCACTAGAGAGGCGGCTGTCTCCTGGTTCGGACATCTATGTGACGGTCTCATCCATGGCTTTAGCAAGAT
CCCAGTGTCGGAACTCTCCTAGCAACTTGTCTTCATCCAGTGATACTGGTTCTGTGGGGGGCACTTACAG
GCAGAAGTCCATGCCCGAAGGGTTTGGAGTGAGCCGTAGATCCCCAGCCTCCATTGACAGGCAGAACACC
CAGTCAGATATTGGTGGCAGCGGAAAATCCACGCCTAGCTGGCAAAGAAGTGAGGATAGCATTGCTGACC
AGATGGCTTACAGTTATAGAGGACCTCAGGATTTCAATTCTTTTGTCCTCGAGCAGCATGAATATACAGA
GCCAACATGCCATCTCCCAGCAGTATCAAAGGTACTGCCAGCTTTCCGAGAGAGCCCCAGTGGGAGATTA
ATGCGGCAGGATCCAGTGGTTCATTTGTCTCCAAACAAACAAGGGCATTCTGATAGCCACTACTCGAGCC
ACTCCAGTAGCAATACTCTCTCCAGCAATGCGTCAAGTGCCCATAGTGATGAGAAGTGGTACGATGGGGA
CCGCACAGAATCCGAACTCAACAGCTATAACTATCTGCAAGGCACCTCTGCTGACAGTGGCATTGACACC
ACCTCTTATGGCCCCAGCCACGGCAGCACAGCCTCGCTGGGGGCTGCCACATCGTCACCTCGCTCAGGGC
CAGGCAAGGAGAAAGTGGCACCCCTATGGCACAGCTCCAGTGAAGTAATCTCCATGGCAGATCGGACTTT
GGAGACAGAGAGCCACGGCCTGGACCGGAAAACAGAGTCTTCCCTGAGCTTAGACATACACAGCAAGAGC
CAAGCCGGCTCGACCCCTCTGACAAGGGAGAACAGCACCTTCAGTATAAACGATGCTGCTTCCCACACAA
GTACCATGAGCTCCCGACACTCTGCCAGCCCAGTGGTTTTCACCAGTGCCCGGAGTTCACCTAAAGAAGA
GCTTCATCCAGCTGCCCCCTCACAGCTCGCACCATCCTTCTCCTCCTCTTCCTCCTCCTCCTCTGGTCCT
AGGAGTTTTTACCCTCGCCAGGGCGCTACTAGCAAGTACCTGATTGGATGGAAAAAACCCGAAGGAACCA
TAAACTCCGTGGGATTTATGGACACGAGAAAGCGTCATCAGAGCGATGGCAATGAAATAGCCCACACCAG
GCTGCGTGCCTCAACCAGAGACCTCCGGGCATCTCCTAAGCCAACCTCCAAGTCCACCATTGAAGAAGAT
CTAAAGAAACTAATTGATCTTGAAAGCCCAACTCCTGAATCACAGAAGAGTTTTAAGTTCCACGCACTCT
CCTCTCCTCAGTCTCCTTTCCCCAGCACCCCCACCTCACGGCGGGCCTTGCACAGAACACTGTCGGACGA
GAGCATTTACAATAGCCAGAGGGAGCACTTTTTCACCTCCAGGGCGTCACTTCTGGACCAAGCCCTGCCC
AACGACGTCCTCTTCAGTAGCACGTACCCTTCTCTCCCCAAGTCGCTCCCGTTGAGGAGGCCTTCTTACA
CCTTAGGAATGAAATCGCTGCATGGAGAGTTCTCAGCCTCGGACAGCTCCCTCACTGACATCCAGGAGAC
CCGCAGGCAGCCTATGCCCGACCCTGGCCTGATGCCCCTGCCTGACACTGCTGCAGACTTGGATTGGTCC
AACCTGGTAGATGCTGCCAAAGCCTATGAGGTCCAGAGAGCCTCATTTTTTGCTGCTAGTGATGAAAACC
ATCGCCCCTTGAGTGCTGCATCCAACAGTGATCAGCTGGAGGACCAGGCTCTGGCCCAGATGAAGCCTTA
CAGCAGCAGTAAAGACTCCTCTCCCACTCTGGCTTCTAAAGTGGACCAGCTGGAAGGTATGCTGAAGATG
CTTCGGGAAGATTTGAAGAAGGAAAAAGAAGACAAAGCTCACCTTCAGGCGGAGGTGCAGCACCTGCGAG
AGGACAACCTGAGGCTACAGGAGGAGTCCCAGAACGCCTCGGACAAGCTGAAGAAGTTCACAGAATGGGT
CTTCAACACCATAGACATGAGCTAG

Translation (1804 aa):
MTSLKRSQTERPLATDRASVVGTDGTPKVHTDDFYMRRFRSQNGSLGSSVMAPVGPPRSEGSHHITSTPG
VPKMGVRARIADWPPRKENIKESSRSSQEIETSSCLDSLSSKSSPVSQGSSVSLNSNDSAMLKSIQNTLK
NKTRPSENMDSRFLMPEAYPSSPRKALRRIRQRSNSDITISELDVDSFDECISPTYKTGPSLHREYGSTS
SIDKQGTSGESFFDLLKGYKDDKSDRGPTPTKLSDFLITGGGKGSGFSLDVIDGPISQRENLRLFKEREK
PLKRRSKSETGDSSIFRKLRNAKGEELGKSSDLEDNRSEDSVRPWTCPKCFAHYDVQSILFDLNEAIMNR
HNVIKRRNTTTGASAAAVASLVSGPLSHSASFSSPMGSTEDLNSKGSLSMDQGDDKSNELVMSCPYFRNE
IGGEGERKISLSKSNSGSFSGCESASFESTLSSHCTNAGVAVLEVPKENLVLHLDRVKRYIVEHVDLGAY
YYRKFFYQKEHWNYFGADENLGPVAVSIRREKPDEMKENGSPYNYRIIFRTSELMTLRGSVLEDAIPSTA
KHSTARGLPLKEVLEHVVPELNVQCLRLAFNTPKVTEQLMKLDEQGLNYQQKVGIMYCKAGQSTEEEMYN
NESAGPAFEEFLQLLGERVRLKGFEKYRAQLDTKTDSTGTHSLYTTYKDYEIMFHVSTMLPYTPNNKQQL
LRKRHIGNDIVTIVFQEPGAQPFSPKNIRSHFQHVFVIVRVHNPCSDSVCYSVAVTRSRDVPSFGPPIPK
GVTFPKSNVFRDFLLAKVINAENAAHKSEKFRAMATRTRQEYLKDLAEKNVTNTPIDPSGKFPFISLASK
KKEKSKPYPGAELSSMGAIVWAVRAEDYNKAMELDCLLGISNEFIVLIEQETKSVVFNCSCRDVIGWTST
DTSLKIFYERGECVSVGSFINIEEIKEIVKRLQFVSKGCESVEMTLRRNGLGQLGFHVNYEGIVADVEPY
GYAWQAGLRQGSRLVEICKVAVATLSHEQMIDLLRTSVTVKVVIIPPHDDCTPRRSCSETYRMPVMEYKM
NEGVSYEFKFPFRNNNKWQRNASKGPHSPQVPSQVQSPMTSRLNAGKGDGKMPPPERAANIPRSISSDGR
PLERRLSPGSDIYVTVSSMALARSQCRNSPSNLSSSSDTGSVGGTYRQKSMPEGFGVSRRSPASIDRQNT
QSDIGGSGKSTPSWQRSEDSIADQMAYSYRGPQDFNSFVLEQHEYTEPTCHLPAVSKVLPAFRESPSGRL
MRQDPVVHLSPNKQGHSDSHYSSHSSSNTLSSNASSAHSDEKWYDGDRTESELNSYNYLQGTSADSGIDT
TSYGPSHGSTASLGAATSSPRSGPGKEKVAPLWHSSSEVISMADRTLETESHGLDRKTESSLSLDIHSKS
QAGSTPLTRENSTFSINDAASHTSTMSSRHSASPVVFTSARSSPKEELHPAAPSQLAPSFSSSSSSSSGP
RSFYPRQGATSKYLIGWKKPEGTINSVGFMDTRKRHQSDGNEIAHTRLRASTRDLRASPKPTSKSTIEED
LKKLIDLESPTPESQKSFKFHALSSPQSPFPSTPTSRRALHRTLSDESIYNSQREHFFTSRASLLDQALP
NDVLFSSTYPSLPKSLPLRRPSYTLGMKSLHGEFSASDSSLTDIQETRRQPMPDPGLMPLPDTAADLDWS
NLVDAAKAYEVQRASFFAASDENHRPLSAASNSDQLEDQALAQMKPYSSSKDSSPTLASKVDQLEGMLKM
LREDLKKEKEDKAHLQAEVQHLREDNLRLQEESQNASDKLKKFTEWVFNTIDMS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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