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Report for CCDS93332.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93332.1 Public Homo sapiens 3 ABI3BP 24 110 108 CCDS HistoryNCBI Gene:25890Re-query CCDS DB by CCDS ID:93332.1Re-query CCDS DB by GeneID:25890See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 93332.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000486770.7 ENSP00000419029.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000486770.7Link to Ensembl Protein Viewer:ENSP00000419029.3Re-query CCDS DB by Nucleotide ID:ENST00000486770Re-query CCDS DB by Protein ID:ENSP00000419029
Original member Current member NCBI NM_001349331.2 NP_001336260.2 Accepted alive Link to Nucleotide Sequence:NM_001349331.2Link to Protein Sequence:NP_001336260.2Re-query CCDS DB by Nucleotide ID:NM_001349331Re-query CCDS DB by Protein ID:NP_001336260Link to BLAST:NP_001336260.2

Chromosomal Locations for CCDS 93332.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 100750495 100750610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100751552 100751674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100752787 100752948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100753819 100753848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100754612 100754691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100765841 100765949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100770743 100770952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100774605 100774673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100775207 100775335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100778284 100778376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100780132 100780209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100789454 100789516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100794923 100795003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100796409 100796468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100804792 100804866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100808161 100808235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100832264 100832350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100833125 100833157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100834684 100834773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100835601 100835660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100837124 100837171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100839569 100839616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100840072 100840164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100840820 100840858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100841998 100842039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100846372 100846446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100847602 100847673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100848801 100848875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100850045 100850119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100850660 100850734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100851875 100851940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100862311 100862385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100864833 100864907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100866879 100866956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100874841 100874933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100875508 100875579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100876512 100876560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100885536 100885588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100886142 100886323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100898762 100898894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100902618 100902686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100926302 100926481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100993306 100993384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3669 nt):
ATGCTCTCCAGTTTGGGGTGTCTACTTCTCTGTGGAAGTATTACACTAGCCCTGGGAAATGCACAGAAAT
TGCCAAAAGGTAAAAGGCCAAACCTCAAAGTCCACATCAATACCACAAGTGACTCCATCCTCTTGAAGTT
CTTGCGTCCAAGTCCAAATGTAAAGCTTGAAGGTCTTCTCCTGGGATATGGCAGCAATGTATCACCAAAC
CAGTACTTCCCTCTTCCCGCTGAAGGGAAATTCACAGAAGCTATAGTTGATGCAGAGCCGAAATATCTGA
TAGTTGTGCGACCTGCTCCACCTCCAAGTCAAAAGAAGTCATGTTCAGGTAAAACTCGTTCTCGCAAACC
TCTGCAGCTGGTGGTTGGCACTCTGACACCGAGCTCGGTCTTCCTGTCCTGGGGTTTCCTCATCAACCCA
CACCATGACTGGACATTGCCAAGTCACTGTCCCAATGACAGATTTTATACAATTCGCTATCGAGAAAAGG
ATAAAGAAAAGAAGTGGATTTTTCAAATCTGTCCAGCCACTGAAACAATTGTGGAAAACCTAAAGCCCAA
CACAGTTTATGAATTTGGAGTGAAAGACAATGTGGAAGGTGGAATTTGGAGTAAGATTTTCAATCACAAG
ACTGTTGTTGGAAGTAAAAAAGTAAATGGGAAAATCCAAAGTACCTATGACCAAGACCACACAGTGCCAG
CATATGTCCCAAGGAAACTAATCCCAATAACAATCATCAAGCAAGTGATTCAGAATGTTACTCACAAGGA
TTCAGCTAAATCCCCAGAAAAAGCTCCACTGGGAGGAGTGATACTAGTCCACCTTATTATTCCAGGTCTT
AATGAAACTACTGTAAAACTTCCTGCATCCCTAATGTTTGAGATTTCAGATGCACTCAAGACACAATTAG
CTAAGAATGAAACCTTGGCATTACCTGCCGAATCTAAAACACCAGAGGTTGAAAAAATCTCAGCACGACC
CACAACAGTGACTCCTGAAACAGTTCCAAGAAGCACTAAACCCACTACGTCTAGTGCATTAGATGTTTCA
GAAACAACACTGGCTTCAAGTGAAAAGCCATGGATTGTGCCTACAGCTAAAATATCTGAAGATTCCAAAG
TTCTGCAGCCTCAAACTGCAACTTATGATGTTTTCTCAAGCCCTACAACATCAGATGAGCCTGAGATATC
AGATTCCTACACAGCAACAAGTGATCGTATTCTGGATTCTATCCCACCTAAAACTTCTAGAACTCTTGAA
CAGCCAAGGGCAACACTGGCTCCAAGTGAAACACCATTTGTTCCTCAAAAACTGGAAATCTTTACCAGTC
CAGAAATGCAGCCTACGACACCTGCTCCCCAGCAAACTACATCTATCCCTTCTACACCTAAACGACGCCC
CCGGCCCAAACCGCCAAGAACCAAACCTGAAAGAACCACAAGTGCCGGAACAATTACACCTAAAATTTCT
AAAAGCCCTGAACCTACATGGACAACACCGGCTCCCGGTAAAACACAATTTATTTCTCTGAAACCTAAAA
TCCCTCTCAGCCCAGAAGTGACACACACCAAACCTGCCCCAGAACCTCAGACTCTACTGCCATCACAGTC
AACAATAGGACCTGAAACACCAGGAACCAAACCTTCAACAACATTAGCACCACGAAAGACCAAAAGACCA
GGTCGTCGCCCCCGCCCCCGTCCCCGCCCTAAAACCACACCTAGTCCAGAAGTGCCCAAGTCCAAACCCG
CTCTGGAACCTGCCACGATACAACCGGAGCCCTTGGTGCCCACAACTGTCTCTGAGCCTGTTCCATTTGA
AACTGAAGCTCCCTCAATGACCATAGTTCCCACCACAGACATTGAGCCTGTAACTGTGAGAACTGAGGCT
ACAGTGACAACATTAGCTCCAAAAACATCGCAACGAACAAGAACACGTCGTCCACGTCCCAAACATAAAA
CCACGCCACGCCCAGAGACACTGCAGACCAAACTAGACTTTGGACCTATTACTCCTGGGACATCTTCAGC
TCCAACAACAACAACAAAAAGAACCCGTCGTCCACATCCCAAACCTAAAACCACGCCCCATCCAGAAGTA
CCTCAAACTAAACTGGCTCCCAAGCAGACACCACGTGCTCCTCCTAAGCCAAAAACATCACCACGCCCAA
GAATCCCACAAACACAACCAGTTCCTAAGGTGCCCCAGCGTGTTACTGCAAAACCAAAAACGTCACCAAG
TCCAGAAGTGTCATACACCACACCTGCTCCAAAAGATGTGCTCCTTCCTCATAAACCATACCCTGAGGTC
TCTCAGAGCGAACCTGCTCCTCTAGAGACACGAGGCATCCCTTTTATACCCATGATTTCCCCAAGTCCTA
GTCAAGAGGAACTACAGACCACTCTGGCGCCACACAGATTTTATACTACTGTGAGGCCCAGAACATCTGA
CAAGCCACACATCAGACCTGGGGTCAAGCAAGCACCCAGGCCATCAGGTGCTGATAGAAATGTATCAGTG
GACTCTACCCACCCCACTAAAAAGCCAGGGACTCGCCGCCCACCCTTGCCACCCAGACCTACACACCCAC
GAAGAAAACCTTTACCACCAAATAATGTCACTGGAAAGCCAGGAAGTGCAGGAATCATTTCATCAGGCCC
AATAACTACACCACCCCTGAGGTCAACACCCAGGCCTACTGGAACTCCCTTGGAGAGAATAGAGACAGAT
ATAAAGCAACCAACAGTTCCTGCCTCTGGAGAAGAACTGGAAAATATAACTGACTTTAGCTCAAGCCCAA
CAAGAGAAACTGATCCTCTTGGGAAGCCAAGATTCAAAGGACCTCATGTGCGATACATCCAAAAGCCTGA
CAACAGTCCCTGCTCCATTACTGACTCTGTCAAACGGTTCCCCAAAGAGGAGGCCACAGAGGGGAATGCC
ACCAGCCCACCACAGAACCCACCCACCAACCTCACTGTGGTCACCGTGGAAGGGTGCCCCTCATTTGTCA
TCTTGGACTGGGAAAAGCCACTAAATGACACTGTCACTGAATATGAAGTTATATCCAGAGAAAATGGGTC
ATTCAGTGGGAAGAACAAGTCCATTCAAATGACAAATCAGACATTTTCCACAGTAGAAAATCTGAAACCA
AACACGAGTTATGAATTCCAGGTGAAACCCAAAAACCCGCTTGGTGAAGGCCCGGTCAGCAACACAGTGG
CATTCAGTACTGAATCAGCGGACCCAAGAGTGAGTGAGCCAGTTTCTGCAGGAAGAGATGCCATCTGGAC
TGAAAGACCCTTTAATTCAGACTCTTACTCAGAGTGTAAGGGCAAACAATATGTCAAAAGGACATGGTAT
AAAAAATTTGTAGGAGTGCAGCTGTGCAACTCTCTCAGATACAAGATTTACTTGAGCGACTCCCTCACAG
GAAAATTTTATAACATAGGTGATCAGAGGGGCCATGGAGAAGATCACTGCCAGTTTGTGGATTCATTTTT
AGATGGACGCACTGGGCAGCAACTCACTTCTGACCAGTTACCAATCAAAGAAGGTTATTTCAGAGCAGTT
CGCCAGGAACCTGTCCAATTTGGAGAAATAGGTGGTCACACCCAAATCAATTATGTTCAGTGGTATGAAT
GTGGGACTACAATTCCTGGAAAATGGTAG

Translation (1222 aa):
MLSSLGCLLLCGSITLALGNAQKLPKGKRPNLKVHINTTSDSILLKFLRPSPNVKLEGLLLGYGSNVSPN
QYFPLPAEGKFTEAIVDAEPKYLIVVRPAPPPSQKKSCSGKTRSRKPLQLVVGTLTPSSVFLSWGFLINP
HHDWTLPSHCPNDRFYTIRYREKDKEKKWIFQICPATETIVENLKPNTVYEFGVKDNVEGGIWSKIFNHK
TVVGSKKVNGKIQSTYDQDHTVPAYVPRKLIPITIIKQVIQNVTHKDSAKSPEKAPLGGVILVHLIIPGL
NETTVKLPASLMFEISDALKTQLAKNETLALPAESKTPEVEKISARPTTVTPETVPRSTKPTTSSALDVS
ETTLASSEKPWIVPTAKISEDSKVLQPQTATYDVFSSPTTSDEPEISDSYTATSDRILDSIPPKTSRTLE
QPRATLAPSETPFVPQKLEIFTSPEMQPTTPAPQQTTSIPSTPKRRPRPKPPRTKPERTTSAGTITPKIS
KSPEPTWTTPAPGKTQFISLKPKIPLSPEVTHTKPAPEPQTLLPSQSTIGPETPGTKPSTTLAPRKTKRP
GRRPRPRPRPKTTPSPEVPKSKPALEPATIQPEPLVPTTVSEPVPFETEAPSMTIVPTTDIEPVTVRTEA
TVTTLAPKTSQRTRTRRPRPKHKTTPRPETLQTKLDFGPITPGTSSAPTTTTKRTRRPHPKPKTTPHPEV
PQTKLAPKQTPRAPPKPKTSPRPRIPQTQPVPKVPQRVTAKPKTSPSPEVSYTTPAPKDVLLPHKPYPEV
SQSEPAPLETRGIPFIPMISPSPSQEELQTTLAPHRFYTTVRPRTSDKPHIRPGVKQAPRPSGADRNVSV
DSTHPTKKPGTRRPPLPPRPTHPRRKPLPPNNVTGKPGSAGIISSGPITTPPLRSTPRPTGTPLERIETD
IKQPTVPASGEELENITDFSSSPTRETDPLGKPRFKGPHVRYIQKPDNSPCSITDSVKRFPKEEATEGNA
TSPPQNPPTNLTVVTVEGCPSFVILDWEKPLNDTVTEYEVISRENGSFSGKNKSIQMTNQTFSTVENLKP
NTSYEFQVKPKNPLGEGPVSNTVAFSTESADPRVSEPVSAGRDAIWTERPFNSDSYSECKGKQYVKRTWY
KKFVGVQLCNSLRYKIYLSDSLTGKFYNIGDQRGHGEDHCQFVDSFLDGRTGQQLTSDQLPIKEGYFRAV
RQEPVQFGEIGGHTQINYVQWYECGTTIPGKW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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