NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS93023.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93023.1 Public Homo sapiens 20 GINS1 24 110 108 CCDS HistoryNCBI Gene:9837Re-query CCDS DB by CCDS ID:93023.1Re-query CCDS DB by GeneID:9837See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93023.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000696806.1 ENSP00000512885.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000696806.1Link to Ensembl Protein Viewer:ENSP00000512885.1Re-query CCDS DB by Nucleotide ID:ENST00000696806Re-query CCDS DB by Protein ID:ENSP00000512885
Current member NCBI NM_001410831.1 NP_001397760.1 Accepted alive Link to Nucleotide Sequence:NM_001410831.1Link to Protein Sequence:NP_001397760.1Re-query CCDS DB by Nucleotide ID:NM_001410831Re-query CCDS DB by Protein ID:NP_001397760Link to BLAST:NP_001397760.1

Chromosomal Locations for CCDS 93023.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 25407821 25407895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 25425211 25425327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 25441702 25441776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 25445923 25445991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (336 nt):
ATGTTCTGCGAAAAAGCCATGGAACTGATCCGCGAGCTGCATCGCGCGCCCGAAGGGCAACTGCCTGCCT
TCAACATGGAGTGGTTTAATAATTATAAAAGATCTCTTGCTACTTATATGAGGTCACTGGGAGGAGATGA
AGGTTTGGACATTACACAGGATATGAAACCACCAAAAAGCCTATATATTGAAGTCCGGTGTCTAAAAGAC
TATGGAGAATTTGAAGTTGATGATGGCACTTCAGTCCTATTAAAAAAAAATAGCCAGCACTTTTTACCTC
GATGGAAATGTGAGCAGCTGATCAGACAAGGAGTCCTGGAGCACATCCTGTCATGA

Translation (111 aa):
MFCEKAMELIRELHRAPEGQLPAFNMEWFNNYKRSLATYMRSLGGDEGLDITQDMKPPKSLYIEVRCLKD
YGEFEVDDGTSVLLKKNSQHFLPRWKCEQLIRQGVLEHILS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH