NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS92674.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92674.1 Public Homo sapiens 19 LOC122539214 24 110 108 CCDS HistoryNCBI Gene:122539214Re-query CCDS DB by CCDS ID:92674.1Re-query CCDS DB by GeneID:122539214See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92674.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000598322.3 ENSP00000506273.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000598322.3Link to Ensembl Protein Viewer:ENSP00000506273.1Re-query CCDS DB by Nucleotide ID:ENST00000598322Re-query CCDS DB by Protein ID:ENSP00000506273
Original member Current member NCBI NM_001396016.1 NP_001382945.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001396016.1Link to Protein Sequence:NP_001382945.1Re-query CCDS DB by Nucleotide ID:NM_001396016Re-query CCDS DB by Protein ID:NP_001382945Link to BLAST:NP_001382945.1

Chromosomal Locations for CCDS 92674.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 52652668 52654403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52655561 52655687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52660762 52660824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1926 nt):
ATGTTACATGAGAAAGCCACCAAGAAGACCAAAGAAAAGGAGACAAGGATGGCTCTTCCTCAGGGATGCT
TGACTTTCAGGGATGTGGCTATAGAATTCTCTTTGGAGGAGTGGAAATGCCTGAACCCTGCACAGAGGGC
TTTATACAGGGCCGTGATGTTGGAGAACTACAGGAACCTGGAGTCTGTGGATAGCTCTTTAAAATCCATG
ACGGAGTTCTCATCAACAGGGCACGGTAATACAGGAGAAGTGATCCACACAGGGACATTGCAAAGACATA
AAAGTCATCACATTGGAGATTTTTGCTTCCCAGAAATCAAGAAAGATATTCATGACTTTGAGTTTCAGTG
GCAAGAAATTAAAAGAAATGGCCATGAAGCACCCATGACAAAAATCAAAAAGTTGACTGGTAGTACAGAC
CGACGTGATCAAAGGCATGCTGGAAACAAGCCTATTAAAGATCAGCTTGGATCAAGCTTTTATTCACATC
TGCCTGAACTGCACGAATTTCAGACTGAAGGGAAAATTGATAATCAAGTGGAGAAGTCTATCAACAATGC
TTCCTTGGTTTCAACATCCCAAAGAATTTCTTGTAGGCTCAAAACCCATATTTCTAATAGGTATGGGAAG
AACTTTCTCCATTCTTCATTATTGACACAAATCCAGGAAGAACACATGAGAGAAAAACCTTTCCAATGTA
ATGAGTGTGGCAAAGCCTTTAATTATAGCTCACATTTAAGAAGACATCATGTAACCCATTCAGGAGAGAA
ACAATATAAATGTGATGTATGTGGCAAAGTGTTTCATCAAAAGCAATACCTTGCATGGCACCATAGAGTT
CATACTGGAGAAAAACCTTACAAGTGTAATGAGTGTTCCAAGACCTTCGGTCACAAGTCATCTCTTACAC
GCCATCATAGACTTCATACTGGAGAAAAACCTTACAAGTGTAATGAGTGTGGTAAGACCTTCAGTCAGAC
GTCATCCCTTGTAGGGCATCGTAGACGTCATACTGGAGAGAAACCTTACAAATGTGAAGGATGTGACAAA
GTTTACAGTTGCAGATCACAACTTGAAACACATAGGCGAATTCATACTGGAGAGAAACCATACAAATGTA
AGGTTTGTGACAAAGCTTTTAGGCATAATTCATGCCTTTCACGCCATAACAGAGTTCATACTGAAGAGAA
ACCTTACACATGTAATGAATGTGGCAAGGTTTTCCAGCGTGATTCATACCTTGCACAACATCAGAGAGTT
CATACTGGAGAGAAACCTTACACATGTAATGAATGTGGTAAGGTTTTTAATCAAAAAGCACACCTTGCAT
GTCATTATAGGCTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGAA
GTCATCCCTTGTGGGCCATCGTAGACTTCATACCGGAGAAAAACCTTACAACTGTCATGAGTGTGGCAAG
ACCTTTGCTCGAAATTCATCCCTTCTAATTCATAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGTA
ATGAATGTGGCAAGGTTTTTAATCAACAGTCAAACCTTGCACAACATCAGAGAGTTCATACTGGAGAGAA
ACCTTACAGGTGTAATGAGTGTGGCAAGACCTTCAGTCATATGTCATCCTTTGTATACCATTATAGACTT
CATAGTGGAGAGAAACCTTACAAGTGCAATGAGTGTGGCAAGACCTTCAGTCATATGTCATCCTTTGTAT
GCCATCATAGACTTCATACTGGAGAAAATCCTTATAAGTGCAATGAGTGTGGCAAAGCCTTTAGTGGGCA
GTCATCACTTATTCATCATCAAGCAATCCATGGTATAGGGAAACTTTACAAATGTAATGATTCTCACAAA
GTCCTCAGTAATGCTACAAGCATTGCAAATCATTAG

Translation (641 aa):
MLHEKATKKTKEKETRMALPQGCLTFRDVAIEFSLEEWKCLNPAQRALYRAVMLENYRNLESVDSSLKSM
TEFSSTGHGNTGEVIHTGTLQRHKSHHIGDFCFPEIKKDIHDFEFQWQEIKRNGHEAPMTKIKKLTGSTD
RRDQRHAGNKPIKDQLGSSFYSHLPELHEFQTEGKIDNQVEKSINNASLVSTSQRISCRLKTHISNRYGK
NFLHSSLLTQIQEEHMREKPFQCNECGKAFNYSSHLRRHHVTHSGEKQYKCDVCGKVFHQKQYLAWHHRV
HTGEKPYKCNECSKTFGHKSSLTRHHRLHTGEKPYKCNECGKTFSQTSSLVGHRRRHTGEKPYKCEGCDK
VYSCRSQLETHRRIHTGEKPYKCKVCDKAFRHNSCLSRHNRVHTEEKPYTCNECGKVFQRDSYLAQHQRV
HTGEKPYTCNECGKVFNQKAHLACHYRLHTGEKPYKCNECGKTFSQKSSLVGHRRLHTGEKPYNCHECGK
TFARNSSLLIHKAIHTGEKPYKCNECGKVFNQQSNLAQHQRVHTGEKPYRCNECGKTFSHMSSFVYHYRL
HSGEKPYKCNECGKTFSHMSSFVCHHRLHTGENPYKCNECGKAFSGQSSLIHHQAIHGIGKLYKCNDSHK
VLSNATSIANH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH