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Report for CCDS92243.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92243.1 Public Homo sapiens 17 DLG4 24 110 108 CCDS HistoryNCBI Gene:1742Re-query CCDS DB by CCDS ID:92243.1Re-query CCDS DB by GeneID:1742See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92243.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000649520.1 ENSP00000497647.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000649520.1Link to Ensembl Protein Viewer:ENSP00000497647.1Re-query CCDS DB by Nucleotide ID:ENST00000649520Re-query CCDS DB by Protein ID:ENSP00000497647
Original member Current member EBI ENST00000649186.1 ENSP00000497879.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000649186.1Link to Ensembl Protein Viewer:ENSP00000497879.1Re-query CCDS DB by Nucleotide ID:ENST00000649186Re-query CCDS DB by Protein ID:ENSP00000497879
Original member Current member NCBI NM_001321076.3 NP_001308005.1 Accepted alive Link to Nucleotide Sequence:NM_001321076.3Link to Protein Sequence:NP_001308005.1Re-query CCDS DB by Nucleotide ID:NM_001321076Re-query CCDS DB by Protein ID:NP_001308005Link to BLAST:NP_001308005.1
Original member Current member NCBI NM_001321077.3 NP_001308006.1 Accepted alive Link to Nucleotide Sequence:NM_001321077.3Link to Protein Sequence:NP_001308006.1Re-query CCDS DB by Nucleotide ID:NM_001321077Re-query CCDS DB by Protein ID:NP_001308006Link to BLAST:NP_001308006.1

Chromosomal Locations for CCDS 92243.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 7190708 7190814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7191267 7191358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7191893 7192002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7192945 7193117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7193483 7193584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7193667 7193714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7193844 7193871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7193964 7194000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7194319 7194495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7196220 7196334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7196473 7196575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7196757 7197052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7202903 7203047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7203193 7203329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7203424 7203593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7203692 7203816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7204008 7204037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1995 nt):
ATGGAATACGAGGAAATCACATTGGAAAGGGGTAACTCAGGTCTGGGCTTCAGCATCGCAGGTGGCACTG
ACAACCCACACATCGGTGACGACCCATCCATTTTCATCACCAAGATCATTCCTGGTGGGGCTGCGGCCCA
GGATGGCCGCCTCAGGGTCAACGACAGCATCCTGTTTGTAAATGAAGTGGACGTGCGCGAGGTGACCCAC
TCAGCGGCGGTGGAAGCCCTCAAAGAGGCAGGCTCCATCGTTCGCCTCTATGTCATGCGCCGGAAGCCCC
CGGCTGAGAAGGTCATGGAGATCAAGCTCATCAAGGGGCCTAAAGGTCTTGGCTTCAGCATCGCAGGGGG
CGTAGGGAACCAGCACATCCCAGGAGATAATAGCATCTATGTAACAAAGATCATCGAAGGGGGTGCTGCC
CACAAGGATGGGAGGTTGCAGATTGGAGACAAGATCCTGGCGGTCAACAGTGTGGGGCTAGAGGACGTCA
TGCATGAAGATGCTGTGGCAGCCCTGAAGAACACGTATGATGTTGTCTACCTAAAGGTGGCCAAGCCCAG
CAATGCCTACCTGAGTGACAGCTATGCTCCCCCAGACATCACAACCTCTTATTCCCAGCACCTGGACAAT
GAGATCAGTCACAGCAGCTACCTGGGCACCGACTACCCCACAGCCATGACCCCCACTTCCCCTCGGCGCT
ACTCTCCAGTGGCCAAGGACCTGCTCGGGGAGGAAGACATTCCCCGAGAACCGAGGCGAATTGTGATCCA
CCGGGGCTCCACGGGCCTGGGCTTCAACATCGTGGGTGGCGAGGACGGTGAAGGCATCTTCATCTCCTTT
ATCCTGGCCGGGGGCCCTGCAGACCTCAGTGGGGAGCTGCGGAAGGGGGACCAGATCCTGTCGGTCAACG
GTGTGGACCTCCGAAATGCCAGCCATGAGCAGGCTGCCATTGCCCTGAAGAATGCGGGTCAGACGGTCAC
GATCATCGCTCAGTATAAACCAGAAGAGTACAGCCGATTCGAGGCCAAGATCCACGACCTTCGGGAACAG
CTCATGAACAGCAGCCTGGGCTCAGGGACTGCGTCCCTGCGGAGCAACCCCAAAAGGGGTTTCTACATCA
GGGCCCTGTTTGATTACGACAAGACCAAGGACTGCGGCTTCCTGAGCCAGGCCCTGAGCTTCCGCTTTGG
GGATGTGCTGCATGTCATCGATGCTAGTGATGAGGAGTGGTGGCAGGCACGGCGGGTCCACTCTGACAGT
GAGACCGACGACATTGGGTTCATCCCCAGCAAACGGCGGGTTGAGCGACGAGAGTGGTCAAGGTTAAAGG
CCAAGGACTGGGGCTCCAGCTCTGGATCGCAGGGTCGAGAAGACTCGGTTCTGAGCTACGAGACAGTGAC
GCAGATGGAAGTGCACTATGCTCGCCCCATCATCATCCTTGGGCCCACCAAGGACCGCGCCAACGATGAT
CTTCTCTCCGAGTTCCCCGACAAGTTTGGATCCTGTGTTCCCCATACGACACGGCCCAAGCGGGAGTATG
AGATAGATGGCCGGGATTACCACTTTGTGTCGTCCCGGGAGAAAATGGAGAAGGACATTCAGGCGCACAA
GTTCATTGAGGCCGGCCAGTACAACAGCCACCTCTATGGGACCAGCGTCCAGTCCGTGCGAGAGGTGGCA
GAGCAGGGGAAGCACTGCATCCTCGATGTCTCGGCCAATGCCGTGCGGCGGCTGCAGGCGGCCCACCTGC
ACCCCATCGCCATCTTCATCCGCCCCCGCTCCCTGGAGAATGTGCTAGAGATTAACAAGCGGATCACAGA
GGAGCAAGCCCGCAAAGCCTTCGACAGAGCCACCAAGCTGGAGCAGGAGTTCACAGAGTGCTTCTCAGCC
ATCGTGGAGGGTGACAGCTTTGAGGAGATCTACCACAAGGTGAAGCGTGTCATCGAGGACCTCTCAGGCC
CCTACATCTGGGTTCCAGCCCGAGAGAGACTCTGA

Translation (664 aa):
MEYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTH
SAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAA
HKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNAYLSDSYAPPDITTSYSQHLDN
EISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRGSTGLGFNIVGGEDGEGIFISF
ILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPEEYSRFEAKIHDLREQ
LMNSSLGSGTASLRSNPKRGFYIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDASDEEWWQARRVHSDS
ETDDIGFIPSKRRVERREWSRLKAKDWGSSSGSQGREDSVLSYETVTQMEVHYARPIIILGPTKDRANDD
LLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIQAHKFIEAGQYNSHLYGTSVQSVREVA
EQGKHCILDVSANAVRRLQAAHLHPIAIFIRPRSLENVLEINKRITEEQARKAFDRATKLEQEFTECFSA
IVEGDSFEEIYHKVKRVIEDLSGPYIWVPARERL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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