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Report for CCDS92193.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92193.1 Public Homo sapiens 16 TLE7 24 110 108 CCDS HistoryNCBI Gene:102723796Re-query CCDS DB by CCDS ID:92193.1Re-query CCDS DB by GeneID:102723796See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92193.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000561754.4 ENSP00000492311.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000561754.4Link to Ensembl Protein Viewer:ENSP00000492311.2Re-query CCDS DB by Nucleotide ID:ENST00000561754Re-query CCDS DB by Protein ID:ENSP00000492311
Original member Current member NCBI NM_001367365.2 NP_001354294.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001367365.2Link to Protein Sequence:NP_001354294.1Re-query CCDS DB by Nucleotide ID:NM_001367365Re-query CCDS DB by Protein ID:NP_001354294Link to BLAST:NP_001354294.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001354294.1 441 A0A1W2PR48 441 100% 0 0

Chromosomal Locations for CCDS 92193.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 71430262 71430366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71430668 71430741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71431121 71431274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71431421 71431562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71431761 71432002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71432110 71432325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71432665 71432723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71432870 71432892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71433014 71433324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1326 nt):
ATGAGTGGAGAGAAGGAAGAGGCATCGCTCAGAATGTTCGGGGCTTATGGTGAGCCAGAGGAGAGGAGGG
ATGTGCTGGAAAGCTCTGGCGTTTCCTCTCAGCCTGAGCCACAAGTGCAGCAGCAACTGGGCAGTCTGTT
GGGAGTGCCCTGGCAGCCCCCGGGCCCCCCAATACAGCACAGCCCTGCTGATCAAGAGACAAGCACGGTG
ACCCAGCAGCAGTGGCACCTCCAGGGCCTGGGTAGATCTGAGCTCCAGGCCGCTGGGCTCCCTGATGCAC
AACCAGGAGAAGCAGCAGAGTCCAGCCCAAGCTTCCTACTGGGTTCTGAGGTTGGCCAGCCTTACTCTTC
TTCCTCTCCCAGTGAAGAAGTCCTCTCATTGCTCAGAGCAATTCCCCCCATTCCAGATGAAGTTGTGGTC
AGGCAGAAGAGGGCCCCACAGGGCTCCTGGAAGGTTGGCACACTCTTCCATGGAAAGAGAGTCTACGCTG
TGGCCATCAGCGGCTCAACCCACCACGTGTACACGTGTGGCTCTGGCTACATCAGGGTATGGGATGAGAG
TGCGCTGCATGCGGGGGAGAAGGCCCCTCGGGCCCAGCTGGACTTGCAGCATCCCCAGGACCGTGTTGTT
ACCTGCAAGCTGTTCCCTGATGAGCGGAGCCTGATCACAGGGGGTGCGTCCCAGGCCGTGACTCTCTGGG
ACTTGGCACCCACCCCCCAGGTCAGGGCACAGCTGACCTCGACGGGCCCCACGTGCTATTCTCTGGCTGT
CTCCTCTGATGCCCATATCTGTTTGGCTTGTTTCCATGGATTTGTTGAGATTTGGGATTTGCAGAACCAA
ATCTTGATCAGGAAGCACGAAGTTCCTGTATACGGGTCCCGATGTGTGGACATCACCGGCAATATATTCT
GGACAGGAGGTGAAGACACCATCCTGTATTCCTGGGACCTGAGGAGCTACCAGAGGCTGCACCAACACAA
CTTACAGAATGAGATCCTCAGCATTACCCACGACCCCGGTGAAGAATGGGTATTGGCGGGCCTGAGAACG
AGTGATATCGTGTTCCTTCACACTCGTCGGAATGAGCAGTTTAAGGCTCTCATGAAAAAATACACCCGCC
ACCACAGCCTCAAGTTTGCCTCCTGTGGGAGCTATTTTGTGACCGCGATAGATACGCGCCTCAGTGGCTT
GGAGGCACCTTCTCTGCAAAAGTTGTTTCAGATAGAGGAGTCTTCAGGTATCCTGTGCTGTGACGTGTCC
TCTGACAACCAGTATCTGGTCATGGGCTCTAGCAGCAGTGCCACCATCTACCAGCTCTTGTATTAA

Translation (441 aa):
MSGEKEEASLRMFGAYGEPEERRDVLESSGVSSQPEPQVQQQLGSLLGVPWQPPGPPIQHSPADQETSTV
TQQQWHLQGLGRSELQAAGLPDAQPGEAAESSPSFLLGSEVGQPYSSSSPSEEVLSLLRAIPPIPDEVVV
RQKRAPQGSWKVGTLFHGKRVYAVAISGSTHHVYTCGSGYIRVWDESALHAGEKAPRAQLDLQHPQDRVV
TCKLFPDERSLITGGASQAVTLWDLAPTPQVRAQLTSTGPTCYSLAVSSDAHICLACFHGFVEIWDLQNQ
ILIRKHEVPVYGSRCVDITGNIFWTGGEDTILYSWDLRSYQRLHQHNLQNEILSITHDPGEEWVLAGLRT
SDIVFLHTRRNEQFKALMKKYTRHHSLKFASCGSYFVTAIDTRLSGLEAPSLQKLFQIEESSGILCCDVS
SDNQYLVMGSSSSATIYQLLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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