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Report for CCDS91298.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91298.1 Public Homo sapiens 10 IFIT3 24 110 108 CCDS HistoryNCBI Gene:3437Re-query CCDS DB by CCDS ID:91298.1Re-query CCDS DB by GeneID:3437See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91298.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000681376.1 ENSP00000504860.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681376.1Link to Ensembl Protein Viewer:ENSP00000504860.1Re-query CCDS DB by Nucleotide ID:ENST00000681376Re-query CCDS DB by Protein ID:ENSP00000504860
Original member Current member EBI ENST00000681178.1 ENSP00000505300.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681178.1Link to Ensembl Protein Viewer:ENSP00000505300.1Re-query CCDS DB by Nucleotide ID:ENST00000681178Re-query CCDS DB by Protein ID:ENSP00000505300
Original member Current member EBI ENST00000681277.1 ENSP00000505695.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681277.1Link to Ensembl Protein Viewer:ENSP00000505695.1Re-query CCDS DB by Nucleotide ID:ENST00000681277Re-query CCDS DB by Protein ID:ENSP00000505695
Original member Current member EBI ENST00000679583.1 ENSP00000506309.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679583.1Link to Ensembl Protein Viewer:ENSP00000506309.1Re-query CCDS DB by Nucleotide ID:ENST00000679583Re-query CCDS DB by Protein ID:ENSP00000506309
Original member Current member EBI ENST00000679536.1 ENSP00000506550.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679536.1Link to Ensembl Protein Viewer:ENSP00000506550.1Re-query CCDS DB by Nucleotide ID:ENST00000679536Re-query CCDS DB by Protein ID:ENSP00000506550
Original member Current member EBI ENST00000680037.1 ENSP00000506557.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680037.1Link to Ensembl Protein Viewer:ENSP00000506557.1Re-query CCDS DB by Nucleotide ID:ENST00000680037Re-query CCDS DB by Protein ID:ENSP00000506557
Original member Current member EBI ENST00000681207.1 ENSP00000506643.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681207.1Link to Ensembl Protein Viewer:ENSP00000506643.1Re-query CCDS DB by Nucleotide ID:ENST00000681207Re-query CCDS DB by Protein ID:ENSP00000506643
Original member Current member NCBI NM_001289758.2 NP_001276687.1 Accepted alive Link to Nucleotide Sequence:NM_001289758.2Link to Protein Sequence:NP_001276687.1Re-query CCDS DB by Nucleotide ID:NM_001289758Re-query CCDS DB by Protein ID:NP_001276687Link to BLAST:NP_001276687.1
Original member Current member NCBI NM_001289759.2 NP_001276688.1 Accepted alive Link to Nucleotide Sequence:NM_001289759.2Link to Protein Sequence:NP_001276688.1Re-query CCDS DB by Nucleotide ID:NM_001289759Re-query CCDS DB by Protein ID:NP_001276688Link to BLAST:NP_001276688.1

Chromosomal Locations for CCDS 91298.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 89338812 89340128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1317 nt):
ATGTACAACTTGTTGGCCTACATAAAACACCTAGATGGTAACAACGAGGCAGCCCTGGAATGCTTACGGC
AAGCTGAAGAGTTAATCCAGCAAGAACATGCTGACCAAGCAGAAATCAGAAGTCTAGTCACTTGGGGAAA
CTACGCCTGGGTCTACTATCACTTGGGCAGACTCTCAGATGCTCAGATTTATGTAGATAAGGTGAAACAA
ACCTGCAAGAAATTTTCAAATCCATACAGTATTGAGTATTCTGAACTTGACTGTGAGGAAGGGTGGACAC
AACTGAAGTGTGGAAGAAATGAAAGGGCGAAGGTGTGTTTTGAGAAGGCTCTGGAAGAAAAGCCCAACAA
CCCAGAATTCTCCTCTGGACTGGCAATTGCGATGTACCATCTGGATAATCACCCAGAGAAACAGTTCTCT
ACTGATGTTTTGAAGCAGGCCATTGAGCTGAGTCCTGATAACCAATACGTCAAGGTTCTCTTGGGCCTGA
AACTGCAGAAGATGAATAAAGAAGCTGAAGGAGAGCAGTTTGTTGAAGAAGCCTTGGAAAAGTCTCCTTG
CCAAACAGATGTCCTCCGCAGTGCAGCCAAATTTTACAGAAGAAAAGGTGACCTAGACAAAGCTATTGAA
CTGTTTCAACGGGTGTTGGAATCCACACCAAACAATGGCTACCTCTATCACCAGATTGGGTGCTGCTACA
AGGCAAAAGTAAGACAAATGCAGAATACAGGAGAATCTGAAGCTAGTGGAAATAAAGAGATGATTGAAGC
ACTAAAGCAATATGCTATGGACTATTCGAATAAAGCTCTTGAGAAGGGACTGAATCCTCTGAATGCATAC
TCCGATCTCGCTGAGTTCCTGGAGACGGAATGTTATCAGACACCATTCAATAAGGAAGTCCCTGATGCTG
AAAAGCAACAATCCCATCAGCGCTACTGCAACCTTCAGAAATATAATGGGAAGTCTGAAGACACTGCTGT
GCAACATGGTTTAGAGGGTTTGTCCATAAGCAAAAAATCAACTGACAAGGAAGAGATCAAAGACCAACCA
CAGAATGTATCTGAAAATCTGCTTCCACAAAATGCACCAAATTATTGGTATCTTCAAGGATTAATTCATA
AGCAGAATGGAGATCTGCTGCAAGCAGCCAAATGTTATGAGAAGGAACTGGGCCGCCTGCTAAGGGATGC
CCCTTCAGGCATAGGCAGTATTTTCCTGTCAGCATCTGAGCTTGAGGATGGTAGTGAGGAAATGGGCCAG
GGCGCAGTCAGCTCCAGTCCCAGAGAGCTCCTCTCTAACTCAGAGCAACTGAACTGA

Translation (438 aa):
MYNLLAYIKHLDGNNEAALECLRQAEELIQQEHADQAEIRSLVTWGNYAWVYYHLGRLSDAQIYVDKVKQ
TCKKFSNPYSIEYSELDCEEGWTQLKCGRNERAKVCFEKALEEKPNNPEFSSGLAIAMYHLDNHPEKQFS
TDVLKQAIELSPDNQYVKVLLGLKLQKMNKEAEGEQFVEEALEKSPCQTDVLRSAAKFYRRKGDLDKAIE
LFQRVLESTPNNGYLYHQIGCCYKAKVRQMQNTGESEASGNKEMIEALKQYAMDYSNKALEKGLNPLNAY
SDLAEFLETECYQTPFNKEVPDAEKQQSHQRYCNLQKYNGKSEDTAVQHGLEGLSISKKSTDKEEIKDQP
QNVSENLLPQNAPNYWYLQGLIHKQNGDLLQAAKCYEKELGRLLRDAPSGIGSIFLSASELEDGSEEMGQ
GAVSSSPRELLSNSEQLN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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