NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS91172.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91172.1 Public Homo sapiens 1 CCSAP 24 110 108 CCDS HistoryNCBI Gene:126731Re-query CCDS DB by CCDS ID:91172.1Re-query CCDS DB by GeneID:126731See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91172.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366686.1 ENSP00000355647.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000366686.1Link to Ensembl Protein Viewer:ENSP00000355647.1Re-query CCDS DB by Nucleotide ID:ENST00000366686Re-query CCDS DB by Protein ID:ENSP00000355647
Current member NCBI NM_001410936.1 NP_001397865.1 Accepted alive Link to Nucleotide Sequence:NM_001410936.1Link to Protein Sequence:NP_001397865.1Re-query CCDS DB by Nucleotide ID:NM_001410936Re-query CCDS DB by Protein ID:NP_001397865Link to BLAST:NP_001397865.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001397865.1 156 Q6IQ19-2 156 100% 0 0

Chromosomal Locations for CCDS 91172.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 229325235 229325411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 229326738 229327006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 229340401 229340425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (471 nt):
ATGGTGCCTGTATTTACCAGCTCAGCACTGCCAGTGAAAGATGTAGAAGATAAACCTGAACAACAAACCA
GAACAAGAGAGACTGACAAATCACCCACCAGTACTGAGCCTCGACAGCAACCAAGTGCCTTATTTGCTAG
AGGAAACAGGAAAGCGGTCAAAAGTCCCCAAAGATCATCGAGTAAAATAAAAGAAAACAAGCATCCATTT
GCTCTTTATGGCTGGGGAGAAAAACAGACCGATACAGGAAGCCAGAAGACTCACAACGTCTGTGCGTCCG
CTCCTGTGCACGAGATTCATGAATCAGCATTACGAGCCAAGAACAGAAGACAGGTGGAAAAAAGGAAACT
GGTTGCTCAAAGGCAGCGAGCTCACTCTGTGGATGTGGAGAAGAACAGAAAGATGAAGGCTTCCTCCTCA
GAGAACCCGTGGATGACAGAATACATGAGGTGCTATTCGGCAAGAGCTTAA

Translation (156 aa):
MVPVFTSSALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRKAVKSPQRSSSKIKENKHPF
ALYGWGEKQTDTGSQKTHNVCASAPVHEIHESALRAKNRRQVEKRKLVAQRQRAHSVDVEKNRKMKASSS
ENPWMTEYMRCYSARA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH