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Report for CCDS88783.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
88783.1 Public Mus musculus 15 Iqank1 23 108 98 CCDS HistoryNCBI Gene:432964Re-query CCDS DB by CCDS ID:88783.1Re-query CCDS DB by GeneID:432964See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 88783.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000187868.2 ENSMUSP00000146582.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000187868.2Link to Ensembl Protein Viewer:ENSMUSP00000146582.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000187868Re-query CCDS DB by Protein ID:ENSMUSP00000146582
Original member Current member NCBI NM_001370920.1 NP_001357849.1 Accepted alive Link to Nucleotide Sequence:NM_001370920.1Link to Protein Sequence:NP_001357849.1Re-query CCDS DB by Nucleotide ID:NM_001370920Re-query CCDS DB by Protein ID:NP_001357849Link to BLAST:NP_001357849.1

Chromosomal Locations for CCDS 88783.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 76011340 76011424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76014903 76014989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76034138 76034271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76034449 76034613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76034691 76034882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76034951 76035076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76045309 76045448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76045544 76045598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76045706 76045798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76046061 76046169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76046274 76046367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76046442 76046576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76046647 76046950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1719 nt):
ATGAGCACTAAGAAGGGGGGGCCCAAAGCTGCATCAGGGAAGGGGCAGGCGCTCCTCCCTGGGTCCAAGC
TTCGAGCTACTGCTGGGAAGCCGAGAGAGAGTCGCCAGCTGCAAAGGAAGGCAAGTCATCCAAGCAAAGG
GTCCTTCTCTGAGAACCCCCAGGCCCCTGCAGCGCCAACCGCAGAGGACAAAGCTGCCATCGTCATCCAG
TGTGCCTTCCGGCAATATCTGGCGCGAAGGGAGCTGGCTCGTCGTTGTCAGGAGCGTCAGGAGTACCTGG
ACGAGATGGAGAAGCTGCAGAAAGAGGCCTACCTGGCCTTGGTGCGCCAGGAGCAGGAGGCGGCGCGGCG
GCAGCGGGAGAAGGAGGAGGCAGAGGAGCGCGCCCGGAGGGAGGAGCTGCAGCGCCGCCGTCGCCTGCTA
GAGGCCGCCTTCGAAGGGGACCTGGGGGAGATCCGCCAGGTGCTCAAGGAGGTGGAGCAGCTGATGACCA
GAGAAGGCGTGGGCTACGACGAGGACGGCAAGGCTCGGCGACTGCAGAGGCGCGTGGCCACCGTGGAGTG
CGAGGACAGCCACGGGAACACGCCTCTCTCCGAGGCGGCGGCGGGCGGGCAGACCATGGCCATCCAGCTG
CTGGCAGAGCTGGGTGCCAACCCCAACACCAAGGGCGCCTTCGGCCGCACGCCACTCTACCGGGCAGCTT
TTGGGGGCCACCTAGAAGCCGTGGAGGAGCTTCTGAAGATCGGAGCAGACCCCCGGATGTACGCGGATGA
CGGGAGCACCCCGGAGCAGGTGGCCTCCCTGGCCGCGGTGGCCAGCGTGCTGCAGTCATGGGACCTGAGC
CTCACAGAAGCTATGCTCAAGAACATGGAGGCAGAGCAGCAGCGCCGTGCTCAGGAGGCCCAGAAGCACA
AGGAGAACGAGGCCAAGCGCATCAACATCAAGGTGCAGCAGCTGGCTAAGGAGCAGCAGAAGTGTCAAAA
GGAGCTCCAGCAGGCCTACTGTGAGCTCAATCGGAGGATCATGGAACATGACAAGTGTGAGAGGAAGTTC
ATGGGCAATACCGAACTCACACTACAGGCCATCAAGGATGCAGAGGCCCAAGTGGACAGATTGCAGCAAG
AGGCACAGAAGGCTGAGGAGACACTGGCCATGGCCAGGCTGGAGCTGCGGGAACAGACTCCGGAGGACGA
GGATACAGAACCTGGGCTCAAGTGCCGGGTCACGGAGCTCCATGACGTGCTGATGAAGGACGTAGGGGAT
CGCATCCGAGCCGATGGACGGTGGCCTCTTGTCATCGACCCTTCTGGCCAGGCAGCCACTTTCTTGAGAT
ACCAGGACACCAACTATGTGGACACCCTAAATCCGGAGCACTTGAGACCTGAGAGGATTCGGCTGGCTCT
CCTGGGGGCACTCAGGTACGGGAAGCCACTGGTGTTTGACCTGCGTCAAGTGAACCTGTTCCCAGTAGTA
CAGCAACAGCTGGAGGTCGTGCAGACTGGCCTGGCACAGGCCCTGTTGAATCGTGGGCTGCTGGCAAAGG
AAGGGTATCTGTCACTGCTTCGGCCAACAGATGGACCTGAGTATGACCCCTCCCAGTTCCAAGAGGCTCG
CCTAGAGAACTTCCGCCTCTTCTTTGTCACCCAAGTTAAGTGGCCCCCAGCTGACCAGCTGCAGACCCTG
CTCCCAGTGCGTGTGCAGATGCCCAGTGGAAGGTTCTAG

Translation (572 aa):
MSTKKGGPKAASGKGQALLPGSKLRATAGKPRESRQLQRKASHPSKGSFSENPQAPAAPTAEDKAAIVIQ
CAFRQYLARRELARRCQERQEYLDEMEKLQKEAYLALVRQEQEAARRQREKEEAEERARREELQRRRRLL
EAAFEGDLGEIRQVLKEVEQLMTREGVGYDEDGKARRLQRRVATVECEDSHGNTPLSEAAAGGQTMAIQL
LAELGANPNTKGAFGRTPLYRAAFGGHLEAVEELLKIGADPRMYADDGSTPEQVASLAAVASVLQSWDLS
LTEAMLKNMEAEQQRRAQEAQKHKENEAKRINIKVQQLAKEQQKCQKELQQAYCELNRRIMEHDKCERKF
MGNTELTLQAIKDAEAQVDRLQQEAQKAEETLAMARLELREQTPEDEDTEPGLKCRVTELHDVLMKDVGD
RIRADGRWPLVIDPSGQAATFLRYQDTNYVDTLNPEHLRPERIRLALLGALRYGKPLVFDLRQVNLFPVV
QQQLEVVQTGLAQALLNRGLLAKEGYLSLLRPTDGPEYDPSQFQEARLENFRLFFVTQVKWPPADQLQTL
LPVRVQMPSGRF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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