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Report for CCDS87758.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87758.1 Public Homo sapiens X LOC101059915 24 110 108 CCDS HistoryNCBI Gene:101059915Re-query CCDS DB by CCDS ID:87758.1Re-query CCDS DB by GeneID:101059915See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 87758.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000636096.2 ENSP00000490941.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000636096.2Link to Ensembl Protein Viewer:ENSP00000490941.2Re-query CCDS DB by Nucleotide ID:ENST00000636096Re-query CCDS DB by Protein ID:ENSP00000490941
Original member Current member NCBI NM_001323075.3 NP_001310004.1 Accepted alive Link to Nucleotide Sequence:NM_001323075.3Link to Protein Sequence:NP_001310004.1Re-query CCDS DB by Nucleotide ID:NM_001323075Re-query CCDS DB by Protein ID:NP_001310004Link to BLAST:NP_001310004.1

Chromosomal Locations for CCDS 87758.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 71667804 71669039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 71669559 71669715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 71670258 71670334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 71670612 71670657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 71671207 71671247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1557 nt):
ATGAGCTCCACGGATGAAGTGTCCGTTTGCAGGGCTGGTTTAGGCCCAGAGGGTGGCGAGCAGGCCGGCG
CCCACACCGCCAGCCCGGGAGCCCCACGGGGTGACGGCCACGGCCGAGACCTCAATTTTGGGGGGCAGCG
CAGTGGCAAGGGTAAGGGCAAGGGCGAGAGCGGGTTCACAGATCCCGAGAGCTTCAGCTTCGAGTCTGAG
AGCGAATTGATAGAGCAGGGAAGGGTGGTGCTCTGGGGCCAGGAAGGCCGGCCTGGCACCCCGGTCGACG
ACCAAGCGGGTGGTGGGGACTACTCTTTCTACCTGGCTGATGAGCCAGCCACCATCATGCCGCCGTCCAG
CGTCCAGGGACACCCGTCCCCAGAAGGCGCCACTGCCAAAGGGTCCACTGACATCTGGGCGGACCTGGAG
GTCGGTCCCAGTTGGAGAGGTGCGCTGAGCCCCAGCCCTGGAGAATGGCAGCAGGCCTCTGCCGGCCCTC
TCCACCTCAGTGTTCCTGGGCCAGGACCGGCCTGGGAGAACCCAGAAAGGGGCTCGAAGAGCAGATTGAG
CTTCCAAGTGGATCCCCAGCAGCCCTCCGCGGAAGGCCCCGCCGGGCTGAATACTGACGACTCTGATTCC
GCAGATGAGAGCAGCGACTTACCGGTGATTAGGGTGATCATTAGCACCAAAGAAGGAAGCCAGGCCAAGC
CCGGAAGCCCCAAGAAGCCAGGAGACACTTGCGGACGCCGCAGTTTCCACCGCAGGGAGAGTTACCTTCA
GGTTCAGGGACCTCTCCTGATCTCTCCTCCCCGCAGACTCACCCCAGTCGTGGAGAGGCCGGCTGTGGGA
GAGCTGGACGTGCCTTCCTTGAAGAAAATGCAGAGCATGGTGTGGGGAAAGAGGGGGGTCAGGCCCAGCT
GCTCAGGAGCTGCCGTTAGAGGGCCCCTACCCCGGGGCACTCTGGGAAGGAAGGTGGCCCAGGAGAAGAA
ATCCCTAGAGGGTGCACCAGAACTGGCCCTGCGGGGAGCCTTTCCTGCCTGGGGGCAGAGACTTTCAGCA
GTTCCACCTGATCCGGCTAGCTTCCCGCCAGTGTCTGGCGTGGGGCTCCTGGGGAAGTCCGTGAGACCCA
AGGAGCCCAAGCACAGCAGCCCTGGGAAGAAACCTGCAGGAAGGAAGACCAGGGAGTCCCAGGCTGCGGC
CAGAGAAGATAATGACCCAAATAGAGATGAGGTCCCAAGGGCCCAACTTCCCACACAGAAGCCAGAGCTG
ATTTCTCTGTCCGTGCGTCGTGGAGAATACAGCAGTGGTGATCCCAACATCAGAGCTCCCCAAGTACTAG
GAACCTCACAGCCCTCGGCCTTTACCTTGAGACGCCTGGTGCCCAGATGCCATGCATCCTCCGGTGACTG
GCAGCCACCTGTCCATCCCCCAAGACCGGAAAGGCAGCAGCAGCCCCCGGGAGCCCAGGGCTGTCCTCGG
TGCATCTTGCTGCAGAGGGAAATTGAAGACCTTAGAGACCAACTAGCTGCCATGCAGTTCCTCACTGACA
AGTTCCAGGACCTGTGA

Translation (518 aa):
MSSTDEVSVCRAGLGPEGGEQAGAHTASPGAPRGDGHGRDLNFGGQRSGKGKGKGESGFTDPESFSFESE
SELIEQGRVVLWGQEGRPGTPVDDQAGGGDYSFYLADEPATIMPPSSVQGHPSPEGATAKGSTDIWADLE
VGPSWRGALSPSPGEWQQASAGPLHLSVPGPGPAWENPERGSKSRLSFQVDPQQPSAEGPAGLNTDDSDS
ADESSDLPVIRVIISTKEGSQAKPGSPKKPGDTCGRRSFHRRESYLQVQGPLLISPPRRLTPVVERPAVG
ELDVPSLKKMQSMVWGKRGVRPSCSGAAVRGPLPRGTLGRKVAQEKKSLEGAPELALRGAFPAWGQRLSA
VPPDPASFPPVSGVGLLGKSVRPKEPKHSSPGKKPAGRKTRESQAAAREDNDPNRDEVPRAQLPTQKPEL
ISLSVRRGEYSSGDPNIRAPQVLGTSQPSAFTLRRLVPRCHASSGDWQPPVHPPRPERQQQPPGAQGCPR
CILLQREIEDLRDQLAAMQFLTDKFQDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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