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Report for CCDS86441.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86441.1 Public Homo sapiens 15 GOLGA8Q 24 110 108 CCDS HistoryNCBI Gene:727909Re-query CCDS DB by CCDS ID:86441.1Re-query CCDS DB by GeneID:727909See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86441.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000562783.2 ENSP00000457904.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000562783.2Link to Ensembl Protein Viewer:ENSP00000457904.1Re-query CCDS DB by Nucleotide ID:ENST00000562783Re-query CCDS DB by Protein ID:ENSP00000457904
Original member Current member NCBI NM_001355476.2 NP_001342405.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001355476.2Link to Protein Sequence:NP_001342405.1Re-query CCDS DB by Nucleotide ID:NM_001355476Re-query CCDS DB by Protein ID:NP_001342405Link to BLAST:NP_001342405.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001342405.1 632 H3BV12 632 100% 0 0

Chromosomal Locations for CCDS 86441.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 30552078 30552125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30553792 30553911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30554801 30554860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30555042 30555122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30555974 30556012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30556275 30556322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30556411 30556495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30556591 30556700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30557751 30557837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30557944 30558051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30558247 30558334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30558711 30558967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30559223 30559291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30560536 30560611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30561043 30561134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30561709 30561809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30561892 30561989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30562085 30562240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 30562326 30562501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1899 nt):
ATGGCAGAAGAAACTCAACACAACAAATTGGCTGCAGCCAAGAAAAAGTTAAAAGAATATTGGCAGAAAA
ACAGACCTAGAGTTCCAGCAGGAGTGAACAGAAACAGGAAAACAAATGGCAGTATCCCTGAGACAGCCAC
TTCCGGTGGTTGCCAGCCACCTGGGGATTCAGCAACAGGTTTCCACAGGGAAGGCCCTACATCATCTGCT
ACCCTGAAAGATCTGGAGAGCCCGTGCCAAGAACGAGCAGTAGTCCTGGATTCAACGTCCGTAAAAATCA
GTCGACTGAAGAACACCATCAAATCTTTGAAACAACAGAAGAAACAAGTGGAACATCAGCTGGAAGAAGA
AAAGAAAGCAAACAACGAGAGACAGAAAGCCGAAAGGGAGCTAGAGGTTCAAATCCAGACATTGATCATA
CAGAAAGAGGAACTAAATACGGACCTGTACCACATGGAACGTTCTCTCAGATACTTTGAAGAAGAGTCCA
AGGACCTGGCTGTCCGCCTGCAACATTCATTGCAGTGTAAAGGAGAGTTAGAGAGGGCTCTGTCTGCTGT
CATCGCCACAGAGAAGAAGAAGGCAAACCAGTTGTCCAGCTGCAGCAAAGCACATACAGAGTGGGAGTTA
GAGCAGTCCCTACAGGACCAGGCACTGCTGAAAGCGCAGCTGACACAGTTGAAGGAGTCATTTCAACAAC
TCCAATTAGAAAGAGATGAGTGTGCTGAACATATAGAAGGAGAGAGGGCCCGGTGGCATCAGAGGATGAG
TAAAATGTTGCAGGAGATTTGCACATTAAAGAAAGAGAAGCAGCAAGATATGCGTCGGGTAGAGGAGCTG
GAGAGGAGCTTGTCCAAACTCAAAAACCAGATGGCTGAACCCTTGCCCCCGGAGCCCCCAGCAGTGCCCT
CTGAGGTGGAGCTGCAGCACCTGAGGAAGGAACTAGAGAGAGTGGCAGGAGAGCTCCAGTCCCAGGTCAA
AAACAATCAGCACATAAGTCTCCTGAACCGGCGACAAGAAGAGAGGATTCGGGAACAGGAAGAGAGGCTT
CGGAAGCAGGAGGAGAGGCTTCAGGAGCAGCACGAGAAGCTTCGGCAGCTGGCCAAGCCACAGAGCGTCT
TCGAGGAGCTGAACAATGAGAACAAGAGCACACTGCAGTTGGAGCAGCAAGTAAAGGAGCTACAGGAGAA
GCTTGGCGAGGAGCACCTGGAAGCGGCCAGCCAGCAGAACCAGCAGCTAACGGCCCAGCTGAACCTCATG
GCTCTCCCTGGGGAAGGACACGGAGGAGAACATCTGGACAGTGAGGGGGAGGAGGCACCTCAGCCCATGC
CGAGTGTCCCAGAGGACCTGGAGAGCAGGGAGGCCATGAGCAGCTTTATGGACCACCTGAAGGAGAAGGC
AGACCTGAGTGAGCTGGTGAAAAAACAAGAACTTCGCTTCATTCAATACTGGCAAGAGAGATGCCATCAG
AAAATCCATCACCTTTTATCAGAACCAGGGGGCCGTGCCAAAGATGCAGCACTGGGAGGAGGACACCATC
AGGCTGGAGCTCAGGGAGGAGATGAAGGTGAAGCTGCTGGAGCTGCAGCAGATGGTATTGCGGCTTACAG
CAACTACAACAATGGGCACAGAAAATTCCTGGCCGCTGCCCACAACTCTGCTGATGAGCCCGGTCCAGGA
GCCCCAGCCCCCCAGGAGCTTGGGGCTGCAGACAAGCATGGTGATCTTCGTGAGGTGACCCTCACCTCCT
CTGCCCAAGGAGAGGCCAGGGAGGATCCTCTCCTTGACAAGCCTACTGCACAGCCGATCGTGCAGGACCA
CCAGGAGCACCCAGGCTTGGGCAGCAACTGCTGTGTGCCATTATTTTGTTGGGCTTGGCTGCCAAGAAGA
AGGAGATAA

Translation (632 aa):
MAEETQHNKLAAAKKKLKEYWQKNRPRVPAGVNRNRKTNGSIPETATSGGCQPPGDSATGFHREGPTSSA
TLKDLESPCQERAVVLDSTSVKISRLKNTIKSLKQQKKQVEHQLEEEKKANNERQKAERELEVQIQTLII
QKEELNTDLYHMERSLRYFEEESKDLAVRLQHSLQCKGELERALSAVIATEKKKANQLSSCSKAHTEWEL
EQSLQDQALLKAQLTQLKESFQQLQLERDECAEHIEGERARWHQRMSKMLQEICTLKKEKQQDMRRVEEL
ERSLSKLKNQMAEPLPPEPPAVPSEVELQHLRKELERVAGELQSQVKNNQHISLLNRRQEERIREQEERL
RKQEERLQEQHEKLRQLAKPQSVFEELNNENKSTLQLEQQVKELQEKLGEEHLEAASQQNQQLTAQLNLM
ALPGEGHGGEHLDSEGEEAPQPMPSVPEDLESREAMSSFMDHLKEKADLSELVKKQELRFIQYWQERCHQ
KIHHLLSEPGGRAKDAALGGGHHQAGAQGGDEGEAAGAAADGIAAYSNYNNGHRKFLAAAHNSADEPGPG
APAPQELGAADKHGDLREVTLTSSAQGEAREDPLLDKPTAQPIVQDHQEHPGLGSNCCVPLFCWAWLPRR
RR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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