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Report for CCDS86331.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86331.1 Public Homo sapiens 12 RIC8B 24 110 108 CCDS HistoryNCBI Gene:55188Re-query CCDS DB by CCDS ID:86331.1Re-query CCDS DB by GeneID:55188See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86331.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355478.6 ENSP00000347662.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000355478.6Link to Ensembl Protein Viewer:ENSP00000347662.2Re-query CCDS DB by Nucleotide ID:ENST00000355478Re-query CCDS DB by Protein ID:ENSP00000347662
Original member Current member NCBI NM_001351364.2 NP_001338293.1 Accepted alive Link to Nucleotide Sequence:NM_001351364.2Link to Protein Sequence:NP_001338293.1Re-query CCDS DB by Nucleotide ID:NM_001351364Re-query CCDS DB by Protein ID:NP_001338293Link to BLAST:NP_001338293.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001338293.1 496 Q9NVN3-3 496 100% 0 0

Chromosomal Locations for CCDS 86331.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 106798058 106798069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 106814696 106815304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 106825726 106825820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 106842589 106842817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 106843852 106843947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 106851450 106851594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 106860268 106860412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 106870823 106870942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 106874481 106874520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1491 nt):
ATGCTTGCCAGTAAACTCTGTGAAGGCATATTTAAAGTCCTTATAAAGGACATCCCAACAACATGTCAAG
TGTCCTGCCTGGAAGTACTCCGCATTCTCTCCAGAGACAAAAAGGTTTTAGTTCCTGTGACAACTAAGGA
AAATATGCAGATACTGCTGCGACTAGCCAAGCTAAATGAGTTAGATGATTCTTTGGAGAAAGTATCAGAG
TTCCCAGTTATTGTGGAGTCATTAAAATGTCTGTGTAATATAGTGTTCAACAGTCAGATGGCACAGCAGC
TCAGCCTGGAACTTAATCTTGCTGCAAAGCTCTGTAACCTCCTGAGAAAGTGCAAGGACCGGAAATTTAT
CAATGACATTAAGTGCTTTGACTTGCGCTTGCTCTTCCTTCTGTCACTTTTGCACACCGACATCAGGTCA
CAATTGCGCTATGAGCTCCAGGGACTACCGCTGCTAACGCAGATCTTGGAAAGTGCCTTTAGCATCAAGT
GGACCGATGAGTATGAATCGGCCATAGACCATAATGGACCTCCTCTCTCACCTCAGGAGACAGACTGTGC
CATTGAGGCCCTCAAAGCTCTCTTCAATGTGACGGTAGACAGTTGGAAGGTGCATAAAGAGAGTGATTCT
CATCAGTTCCGTGTAATGGCAGCTGTCCTTCGTCATTGTTTACTAATCGTAGGTCCAACTGAAGACAAAA
CAGAAGAGCTACACAGCAATGCAGTCAACCTTTTAAGCAATGTTCCAGTCTCTTGTTTGGATGTTCTCAT
TTGTCCGTTAACCCATGAAGAAACAGCCCAAGAGGCAACGACTCTAGATGAACTGCCCAGTAATAAAACA
GCTGAGAAAGAAACAGTTTTGAAAAACAATACCATGGTATACAATGGTATGAATATGGAGGCCATTCATG
TTTTACTGAATTTTATGGAGAAGAGAATAGACAAGGGAAGCAGCTATAGAGAGGGTCTAACTCCAGTTCT
CAGCTTATTAACCGAATGTTCCCGAGCCCATCGAAACATCCGAAAATTTCTCAAAGATCAGGTTTTACCA
CCGTTGAGGGATGTGACAAATCGACCTGAAGTTGGCTCAACTGTGAGAAATAAGCTGGTGCGCCTCATGA
CACATGTTGACCTTGGAGTCAAGCAAATTGCTGCTGAATTCCTTTTTGTCCTTTGCAAAGAGAGAGTGGA
TAGTCTGCTGAAATACACTGGCTATGGGAATGCTGCAGGACTGTTGGCGGCCAGGGGCCTCTTGGCTGGA
GGAAGAGGAGATAATTGGTACTCAGAGGATGAGGACACAGACACTGAAGAATACAAAAATGCAAAACCAA
ACATTAATCTTATCACTGGTCATTTAGAGGAACCAATGCCAAACCCCATAGATGAAATGACAGAAGAACA
AAAAGAATATGAAGCCATGAAACTTGTCAACATGCTTGATAAACTTTCCAGGAGAGCAGATGTGAAGGAC
CTGCACCAGGATGGTGGTTAG

Translation (496 aa):
MLASKLCEGIFKVLIKDIPTTCQVSCLEVLRILSRDKKVLVPVTTKENMQILLRLAKLNELDDSLEKVSE
FPVIVESLKCLCNIVFNSQMAQQLSLELNLAAKLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIRS
QLRYELQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVDSWKVHKESDS
HQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPLTHEETAQEATTLDELPSNKT
AEKETVLKNNTMVYNGMNMEAIHVLLNFMEKRIDKGSSYREGLTPVLSLLTECSRAHRNIRKFLKDQVLP
PLRDVTNRPEVGSTVRNKLVRLMTHVDLGVKQIAAEFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAG
GRGDNWYSEDEDTDTEEYKNAKPNINLITGHLEEPMPNPIDEMTEEQKEYEAMKLVNMLDKLSRRADVKD
LHQDGG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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