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Report for CCDS83934.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83934.1 Public Mus musculus 11 Wbp2 23 108 98 CCDS HistoryNCBI Gene:22378Re-query CCDS DB by CCDS ID:83934.1Re-query CCDS DB by GeneID:22378See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83934.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000106444.3 ENSMUSP00000102052.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106444.3Link to Ensembl Protein Viewer:ENSMUSP00000102052.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000106444Re-query CCDS DB by Protein ID:ENSMUSP00000102052
Original member Current member NCBI NM_001347642.1 NP_001334571.1 Accepted alive Link to Nucleotide Sequence:NM_001347642.1Link to Protein Sequence:NP_001334571.1Re-query CCDS DB by Nucleotide ID:NM_001347642Re-query CCDS DB by Protein ID:NP_001334571Link to BLAST:NP_001334571.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001334571.1 216 P97765-2 216 100% 0 0

Chromosomal Locations for CCDS 83934.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 116079543 116079596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 116079708 116079784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 116080222 116080344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 116081232 116081324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 116082276 116082411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 116083839 116083947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 116086867 116086925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (651 nt):
ATGGCGCTCAACAAGAATCACTCAGAGGGCGGCGGAGTGATCGTCAACAACACTGAGAGCATCCTAATGT
CCTATGATCATGTGGAGCTTACCTTCAACGACATGAAGAATGTGCCAGAGGCCTTCAAAGGGACCAAGAA
AGGCACCGTCTACCTTACTCCGTACCGGGTCATCTTTCTGTCTAAGGGGAAGGACGCCATGCAGTCCTTC
ATGATGCCCTTTTACCTGATGAAGGACTGTGAGATTAAGCAGCCGGTGTTTGGTGCGAACTTCATTAAGG
GAATAGTGAAGGCTGAAGCAGGAGGTGGCTGGGAAGGCTCCGCCTCCTACAAGCTGACCTTCACAGCAGG
GGGCGCCATTGAGTTTGGGCAGAGGATGCTCCAGGTGGCATCTCAAGAGTTCTATCCAGGACCTCCCATG
ATGGATGGGGCCATGGGCTATGTACAGCCCCCACCACCACCCTATCCTGGGCCCATGGAGCCTCCGGTCA
GCGGCCCCAGTGCCCCCGCTACTCCTGCAGCCGAGGCCAAGGCTGCAGAAGCCGCTGCCAGTGCCTATTA
CAACCCAGGCAACCCACACAATGTCTACATGCCCACGAGCCAGCCTCCACCACCACCCTACTACCCCCCA
GAAGACAAGAAGACCCAGTAG

Translation (216 aa):
MALNKNHSEGGGVIVNNTESILMSYDHVELTFNDMKNVPEAFKGTKKGTVYLTPYRVIFLSKGKDAMQSF
MMPFYLMKDCEIKQPVFGANFIKGIVKAEAGGGWEGSASYKLTFTAGGAIEFGQRMLQVASQEFYPGPPM
MDGAMGYVQPPPPPYPGPMEPPVSGPSAPATPAAEAKAAEAAASAYYNPGNPHNVYMPTSQPPPPPYYPP
EDKKTQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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