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Report for CCDS8367.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8367.1 Public Homo sapiens 11 ZBTB16 24 110 108 CCDS HistoryNCBI Gene:7704Re-query CCDS DB by CCDS ID:8367.1Re-query CCDS DB by GeneID:7704See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8367.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335953.9 ENSP00000338157.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335953.9Link to Ensembl Protein Viewer:ENSP00000338157.4Re-query CCDS DB by Nucleotide ID:ENST00000335953Re-query CCDS DB by Protein ID:ENSP00000338157
Original member Current member EBI ENST00000392996.2 ENSP00000376721.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392996.2Link to Ensembl Protein Viewer:ENSP00000376721.2Re-query CCDS DB by Nucleotide ID:ENST00000392996Re-query CCDS DB by Protein ID:ENSP00000376721
Original member Current member EBI ENST00000682278.1 ENSP00000506794.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682278.1Link to Ensembl Protein Viewer:ENSP00000506794.1Re-query CCDS DB by Nucleotide ID:ENST00000682278Re-query CCDS DB by Protein ID:ENSP00000506794
Original member Current member EBI ENST00000682971.1 ENSP00000506894.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682971.1Link to Ensembl Protein Viewer:ENSP00000506894.1Re-query CCDS DB by Nucleotide ID:ENST00000682971Re-query CCDS DB by Protein ID:ENSP00000506894
Original member Current member EBI ENST00000682697.1 ENSP00000506924.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682697.1Link to Ensembl Protein Viewer:ENSP00000506924.1Re-query CCDS DB by Nucleotide ID:ENST00000682697Re-query CCDS DB by Protein ID:ENSP00000506924
Original member Current member EBI ENST00000683554.1 ENSP00000506953.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000683554.1Link to Ensembl Protein Viewer:ENSP00000506953.1Re-query CCDS DB by Nucleotide ID:ENST00000683554Re-query CCDS DB by Protein ID:ENSP00000506953
Original member Current member EBI ENST00000684295.1 ENSP00000507788.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000684295.1Link to Ensembl Protein Viewer:ENSP00000507788.1Re-query CCDS DB by Nucleotide ID:ENST00000684295Re-query CCDS DB by Protein ID:ENSP00000507788
Original member Current member EBI ENST00000683318.1 ENSP00000508351.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000683318.1Link to Ensembl Protein Viewer:ENSP00000508351.1Re-query CCDS DB by Nucleotide ID:ENST00000683318Re-query CCDS DB by Protein ID:ENSP00000508351
Original member Current member NCBI NM_001018011.3 NP_001018011.1 Accepted alive Link to Nucleotide Sequence:NM_001018011.3Link to Protein Sequence:NP_001018011.1Re-query CCDS DB by Nucleotide ID:NM_001018011Re-query CCDS DB by Protein ID:NP_001018011Link to BLAST:NP_001018011.1
Original member Current member NCBI NM_001354750.2 NP_001341679.1 Accepted alive Link to Nucleotide Sequence:NM_001354750.2Link to Protein Sequence:NP_001341679.1Re-query CCDS DB by Nucleotide ID:NM_001354750Re-query CCDS DB by Protein ID:NP_001341679Link to BLAST:NP_001341679.1
Original member Current member NCBI NM_001354751.2 NP_001341680.1 Accepted alive Link to Nucleotide Sequence:NM_001354751.2Link to Protein Sequence:NP_001341680.1Re-query CCDS DB by Nucleotide ID:NM_001354751Re-query CCDS DB by Protein ID:NP_001341680Link to BLAST:NP_001341680.1
Original member Current member NCBI NM_006006.6 NP_005997.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006006.6Link to Protein Sequence:NP_005997.2Re-query CCDS DB by Nucleotide ID:NM_006006Re-query CCDS DB by Protein ID:NP_005997Link to BLAST:NP_005997.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001018011.1 673 Q05516-1 673 100% 0 0
NP_001341679.1 673 Q05516-1 673 100% 0 0
NP_001341680.1 673 Q05516-1 673 100% 0 0
NP_005997.2 673 Q05516-1 673 100% 0 0

Chromosomal Locations for CCDS 8367.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 114063301 114064568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114156337 114156434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114186952 114187038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114242167 114242337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114247198 114247365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114250326 114250555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2022 nt):
ATGGATCTGACAAAAATGGGCATGATCCAGCTGCAGAACCCTAGCCACCCCACGGGGCTACTGTGCAAGG
CCAACCAGATGCGGCTGGCCGGGACTTTGTGCGATGTGGTCATCATGGTGGACAGCCAGGAGTTCCACGC
CCACCGGACGGTGCTGGCCTGCACCAGCAAGATGTTTGAGATCCTCTTCCACCGCAATAGTCAACACTAT
ACTTTGGACTTCCTCTCGCCAAAGACCTTCCAGCAGATTCTGGAGTATGCATATACAGCCACGCTGCAAG
CCAAGGCGGAGGACCTGGATGACCTGCTGTATGCGGCCGAGATCCTGGAGATCGAGTACCTGGAGGAACA
GTGCCTGAAGATGCTGGAGACCATCCAGGCCTCAGACGACAATGACACGGAGGCCACCATGGCCGATGGC
GGGGCCGAGGAAGAAGAGGACCGCAAGGCTCGGTACCTCAAGAACATCTTCATCTCGAAGCATTCCAGCG
AGGAGAGTGGGTATGCCAGTGTGGCTGGACAGAGCCTCCCTGGGCCCATGGTGGACCAGAGCCCTTCAGT
CTCCACTTCATTTGGTCTTTCAGCCATGAGTCCCACCAAGGCTGCAGTGGACAGTTTGATGACCATAGGA
CAGTCTCTCCTGCAGGGAACTCTTCAGCCACCTGCAGGGCCCGAGGAGCCAACTCTGGCTGGGGGTGGGC
GGCACCCTGGGGTGGCTGAGGTGAAGACGGAGATGATGCAGGTGGATGAGGTGCCCAGCCAGGACAGCCC
TGGGGCAGCCGAGTCCAGCATCTCAGGAGGGATGGGGGACAAGGTTGAGGAAAGAGGCAAAGAGGGGCCT
GGGACCCCGACTCGAAGCAGCGTCATCACCAGTGCTAGGGAGCTACACTATGGGCGAGAGGAGAGTGCCG
AGCAGGTGCCACCCCCAGCTGAGGCTGGCCAGGCCCCCACTGGCCGACCTGAGCACCCAGCACCCCCGCC
TGAGAAGCATCTGGGCATCTACTCCGTGTTGCCCAACCACAAGGCTGACGCTGTATTGAGCATGCCGTCT
TCCGTGACCTCTGGCCTCCACGTGCAGCCTGCCCTGGCTGTCTCCATGGACTTCAGCACCTATGGGGGGC
TGCTGCCCCAGGGCTTCATCCAGAGGGAGCTGTTCAGCAAGCTGGGGGAGCTGGCTGTGGGCATGAAGTC
AGAGAGCCGGACCATCGGAGAGCAGTGCAGCGTGTGTGGGGTCGAGCTTCCTGATAACGAGGCTGTGGAG
CAGCACAGGAAGCTGCACAGTGGGATGAAGACGTACGGGTGCGAGCTCTGCGGGAAGCGGTTCCTGGATA
GTTTGCGGCTGAGAATGCACTTACTGGCTCATTCAGCGGGTGCCAAAGCCTTTGTCTGTGATCAGTGCGG
TGCACAGTTTTCGAAGGAGGATGCCCTGGAGACACACAGGCAGACCCATACTGGCACTGACATGGCCGTC
TTCTGTCTGCTGTGTGGGAAGCGCTTCCAGGCGCAGAGCGCACTGCAGCAGCACATGGAGGTCCACGCGG
GCGTGCGCAGCTACATCTGCAGTGAGTGCAACCGCACCTTCCCCAGCCACACGGCTCTCAAACGCCACCT
GCGCTCACATACAGGCGACCACCCCTACGAGTGTGAGTTCTGTGGCAGCTGCTTCCGGGATGAGAGCACA
CTCAAGAGCCACAAACGCATCCACACGGGTGAGAAACCCTACGAGTGCAATGGCTGTGGCAAGAAGTTCA
GCCTCAAGCATCAGCTGGAGACGCACTATAGGGTGCACACAGGTGAGAAGCCCTTTGAGTGTAAGCTCTG
CCACCAGCGCTCCCGGGACTACTCGGCCATGATCAAGCACCTGAGAACGCACAACGGCGCCTCGCCCTAC
CAGTGCACCATCTGCACAGAGTACTGCCCCAGCCTCTCCTCCATGCAGAAGCACATGAAGGGCCACAAGC
CCGAGGAGATCCCGCCCGACTGGAGGATAGAGAAGACGTACCTCTACCTGTGCTATGTGTGA

Translation (673 aa):
MDLTKMGMIQLQNPSHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRNSQHY
TLDFLSPKTFQQILEYAYTATLQAKAEDLDDLLYAAEILEIEYLEEQCLKMLETIQASDDNDTEATMADG
GAEEEEDRKARYLKNIFISKHSSEESGYASVAGQSLPGPMVDQSPSVSTSFGLSAMSPTKAAVDSLMTIG
QSLLQGTLQPPAGPEEPTLAGGGRHPGVAEVKTEMMQVDEVPSQDSPGAAESSISGGMGDKVEERGKEGP
GTPTRSSVITSARELHYGREESAEQVPPPAEAGQAPTGRPEHPAPPPEKHLGIYSVLPNHKADAVLSMPS
SVTSGLHVQPALAVSMDFSTYGGLLPQGFIQRELFSKLGELAVGMKSESRTIGEQCSVCGVELPDNEAVE
QHRKLHSGMKTYGCELCGKRFLDSLRLRMHLLAHSAGAKAFVCDQCGAQFSKEDALETHRQTHTGTDMAV
FCLLCGKRFQAQSALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTGDHPYECEFCGSCFRDEST
LKSHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPY
QCTICTEYCPSLSSMQKHMKGHKPEEIPPDWRIEKTYLYLCYV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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