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Report for CCDS82958.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82958.1 Public Homo sapiens 4 INPP4B 24 110 108 CCDS HistoryNCBI Gene:8821Re-query CCDS DB by CCDS ID:82958.1Re-query CCDS DB by GeneID:8821See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82958.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000509777.5 ENSP00000422793.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000509777.5Link to Ensembl Protein Viewer:ENSP00000422793.1Re-query CCDS DB by Nucleotide ID:ENST00000509777Re-query CCDS DB by Protein ID:ENSP00000422793
Original member Current member NCBI NM_001331040.1 NP_001317969.1 Accepted alive Link to Nucleotide Sequence:NM_001331040.1Link to Protein Sequence:NP_001317969.1Re-query CCDS DB by Nucleotide ID:NM_001331040Re-query CCDS DB by Protein ID:NP_001317969Link to BLAST:NP_001317969.1
Original member Current member NCBI NM_001385335.1 NP_001372264.1 Accepted alive Link to Nucleotide Sequence:NM_001385335.1Link to Protein Sequence:NP_001372264.1Re-query CCDS DB by Nucleotide ID:NM_001385335Re-query CCDS DB by Protein ID:NP_001372264Link to BLAST:NP_001372264.1

Chromosomal Locations for CCDS 82958.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 142030128 142030302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142082031 142082185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142086144 142086256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142108093 142108190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142112542 142112682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142122128 142122245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142123292 142123415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142124588 142124760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142145840 142145996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142160358 142160561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142173632 142173809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142193087 142193195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142208425 142208529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142208896 142209026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142237864 142238011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142260492 142260564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142270663 142270774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142305458 142305537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142314712 142314762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142402938 142403054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142405206 142405324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142429173 142429217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142431169 142431259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2817 nt):
ATGGAAATTAAAGAGGAAGGGGCATCAGAAGAAGGGCAGCACTTTCTTCCTACAGCCCAGGCCAATGATC
CCGGGGACTGTCAGTTCACAAGTATCCAGAAGACTCCAAATGAACCGCAGTTGGAATTCATCCTTGCATG
CAAGGATCTCGTGGCTCCTGTCCGTGATCGTAAACTGAATACACTGGTGCAGATCTCCGTAATCCACCCC
GTGGAGCAGAGTCTGACAAGATACTCCAGCACCGAAATTGTGGAGGGAACAAGGGACCCACTGTTTTTGA
CTGGTGTCACATTCCCATCTGAGTATCCCATCTATGAGGAGACCAAAATAAAACTAACAGTCTATGATGT
CAAGGATAAGTCTCATGACACCGTTCGAACCAGTGTCCTACCAGAACATAAGGATCCCCCGCCAGAAGTT
GGGCGAAGTTTCTTGGGCTATGCCAGTTTTAAAGTGGGAGAGCTGCTGAAGTCAAAGGAGCAATTGCTGG
TCCTGAGCCTGAGAACTTCAGATGGTGGCAAAGTGGTTGGCACCATAGAAGTCAGTGTCGTGAAGATGGG
GGAGATTGAGGATGGGGAAGCCGACCACATCACCACAGATGTACAGGGACAAAAGTGTGCCCTGGTATGT
GAATGTACAGCCCCGGAAAGTGTGAGCGGAAAAGATAACTTACCTTTTTTGAATTCAGTGTTAAAGAACC
CAGTATGTAAATTATATAGATTTCCCACATCTGACAATAAGTGGATGCGAATTCGAGAGCAGATGTCAGA
GAGCATTCTTTCCTTTCATATTCCTAAGGAATTGATTTCCCTTCACATTAAAGAAGATTTGTGCAGAAAC
CAGGAGATAAAAGAACTTGGTGAGCTTTCTCCACATTGGGACAATCTGCGAAAAAATGTCCTTACTCACT
GTGATCAAATGGTGAATATGTACCAAGACATTCTGACAGAACTTAGCAAGGAAACAGGGTCCTCTTTCAA
ATCAAGCAGCAGCAAAGGAGAGAAAACATTAGAATTTGTTCCAATAAATCTACATCTGCAAAGAATGCAG
GTACACAGCCCTCACTTGAAAGATGCTCTCTACGATGTCATCACTGTGGGAGCCCCAGCTGCCCATTTTC
AGGGATTTAAGAATGGTGGTCTTCGGAAGCTACTCCATAGATTTGAAACAGAAAGAAGAAATACCGGATA
CCAGTTTATTTACTATTCACCTGAAAACACAGCCAAAGCAAAGGAAGTTCTCAGCAACATCAATCAACTA
CAACCTCTTATAGCAACCCATGCAGACCTACTGCTTAATTCTGCAAGCCAGCATTCTCCAGACAGCTTGA
AGAATTCTTTAAAGATGCTTTCAGAAAAAACAGAGCTTTTTGTACATGCCTTCAAGGATCAACTTGTCAG
GAGTGCTCTTTTAGCACTCTACACTGCAAGGCCAGGAGGCATTCTTAAGAAGCCACCCTCTCCTAAGAGC
AGCACAGAGGAGAGCAGTCCCCAAGACCAACCCCCAGTGATGAGAGGGCAGGACTCCATACCACATCATT
CAGACTATGATGAGGAAGAGTGGGACAGGGTGTGGGCCAATGTGGGGAAGAGCCTGAACTGCATTATTGC
TATGGTGGACAAACTGATTGAAAGAGATGGTGGCAGTGAAGGCAGTGGCGGCAACAATGATGGAGAAAAG
GAACCTTCATTAACAGATGCCATTCCCTCTCACCCAAGAGAGGACTGGTATGAACAGTTGTATCCCCTCA
TCCTTACCCTGAAGGACTGCATGGGAGAAGTGGTGAACCGAGCCAAGCAGTCCCTGACATTTGTGCTCCT
TCAGGAACTTGCGTACAGCTTGCCCCAGTGTCTGATGCTGACGCTAAGAAGAGACATCGTCTTCAGCCAA
GCACTTGCTGGATTGGTTTGTGGTTTTATCATCAAATTACAGACAAGTCTGTATGACCCAGGCTTCCTAC
AGCAGCTTCACACAGTGGGGTTGATAGTACAATATGAAGGACTGCTAAGTACATACAGCGATGAAATTGG
AATGCTAGAGGACATGGCCGTTGGCATTTCCGATTTAAAGAAAGTTGCATTTAAAATAATTGAAGCCAAA
TCCAATGATGTGTTGCCAGTTATAACAGGAAGACGAGAACATTACGTGGTAGAGGTCAAGCTTCCAGCCA
GAATGTTTGAGTCACTACCTCTACAGATTAAAGAAGGACAGTTGCTTCATGTGTATCCAGTACTTTTTAA
TGTTGGAATCAATGAACAGCAAACTCTGGCTGAAAGGTTTGGAGATGTCTCTTTGCAAGAAAGTATTAAT
CAGGAAAACTTCGAACTTCTACAAGAATATTACAAGATATTTATGGAAAAGATGCCTCCTGATTATATTT
CACATTTTCAGGAACAAAATGATTTAAAAGCATTGCTAGAAAATCTCCTTCAAAATATCCAATCCAAAAA
AAGAAAGAATGTAGAAATTATGTGGCTGGCTGCAACGATTTGCCGCAAACTGAATGGTATTCGTTTCACC
TGTTGTAAAAGTGCCAAAGACAGGACATCGATGTCAGTGACACTTGAACAATGCTCAATCTTGAGAGATG
AGCACCAGTTACACAAGGACTTCTTTATCCGAGCGCTGGATTGCATGAGAAGCAGACAAACCCAGGGAGC
ACTGAATGAATCCGATGATCCTGAAACAGGCTGTCTAACTGATAACAAGCCAACTTCTCGACACTTCTAT
CCTGTCGCCTTGCTGCTTGTCAGCTCACACCTGCTAGTTGTGTGGCTTATTTTAAGTCTGGCGTTACTCT
TAGCCAAATACCAATAA

Translation (938 aa):
MEIKEEGASEEGQHFLPTAQANDPGDCQFTSIQKTPNEPQLEFILACKDLVAPVRDRKLNTLVQISVIHP
VEQSLTRYSSTEIVEGTRDPLFLTGVTFPSEYPIYEETKIKLTVYDVKDKSHDTVRTSVLPEHKDPPPEV
GRSFLGYASFKVGELLKSKEQLLVLSLRTSDGGKVVGTIEVSVVKMGEIEDGEADHITTDVQGQKCALVC
ECTAPESVSGKDNLPFLNSVLKNPVCKLYRFPTSDNKWMRIREQMSESILSFHIPKELISLHIKEDLCRN
QEIKELGELSPHWDNLRKNVLTHCDQMVNMYQDILTELSKETGSSFKSSSSKGEKTLEFVPINLHLQRMQ
VHSPHLKDALYDVITVGAPAAHFQGFKNGGLRKLLHRFETERRNTGYQFIYYSPENTAKAKEVLSNINQL
QPLIATHADLLLNSASQHSPDSLKNSLKMLSEKTELFVHAFKDQLVRSALLALYTARPGGILKKPPSPKS
STEESSPQDQPPVMRGQDSIPHHSDYDEEEWDRVWANVGKSLNCIIAMVDKLIERDGGSEGSGGNNDGEK
EPSLTDAIPSHPREDWYEQLYPLILTLKDCMGEVVNRAKQSLTFVLLQELAYSLPQCLMLTLRRDIVFSQ
ALAGLVCGFIIKLQTSLYDPGFLQQLHTVGLIVQYEGLLSTYSDEIGMLEDMAVGISDLKKVAFKIIEAK
SNDVLPVITGRREHYVVEVKLPARMFESLPLQIKEGQLLHVYPVLFNVGINEQQTLAERFGDVSLQESIN
QENFELLQEYYKIFMEKMPPDYISHFQEQNDLKALLENLLQNIQSKKRKNVEIMWLAATICRKLNGIRFT
CCKSAKDRTSMSVTLEQCSILRDEHQLHKDFFIRALDCMRSRQTQGALNESDDPETGCLTDNKPTSRHFY
PVALLLVSSHLLVVWLILSLALLLAKYQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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