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Report for CCDS81285.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81285.1 Public Homo sapiens 1 CEP85 24 110 108 CCDS HistoryNCBI Gene:64793Re-query CCDS DB by CCDS ID:81285.1Re-query CCDS DB by GeneID:64793See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81285.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000451429.8 ENSP00000417002.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000451429.8Link to Ensembl Protein Viewer:ENSP00000417002.3Re-query CCDS DB by Nucleotide ID:ENST00000451429Re-query CCDS DB by Protein ID:ENSP00000417002
Original member Current member NCBI NM_001319944.2 NP_001306873.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001319944.2Link to Protein Sequence:NP_001306873.1Re-query CCDS DB by Nucleotide ID:NM_001319944Re-query CCDS DB by Protein ID:NP_001306873Link to BLAST:NP_001306873.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001306873.1 761 Q6P2H3-2 761 100% 0 0

Chromosomal Locations for CCDS 81285.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 26239784 26239838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26244166 26244318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26255171 26255865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26257597 26257730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26258143 26258260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26259617 26259802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26268483 26268635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26269460 26269614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26271014 26271107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26272021 26272071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26274964 26275071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26276535 26276760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26277136 26277293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2286 nt):
ATGGCCATGCAGGAGAAATATCCAACTGAGGGGATCTCTCACGTCACTTCACCGAGTTCCGATGTGATTC
AGAAGGGCAGTTCCCTGGGGACTGAATGGCAGACCCCAGTTATCTCGGAGCCCTTTCGGAGCCGCTTCAG
CCGCTGTTCAAGTGTAGCCGACAGTGGGGACACAGCCATTGGTACATCATGCTCAGATATTGCGGAGGAT
TTTTGCAGCTCAAGTGGCAGTCCTCCTTTCCAGCCCATCAAAAGCCACGTAACCATTCCAACAGCCCATG
TGATGCCTTCTACTTTAGGGACCTCTCCTGCCAAGCCAAATTCTACACCTGTTGGACCCTCTTCCTCTAA
ACTCCCTTTGTCAGGGTTGGCTGAAAGTGTGGGAATGACAAGAAATGGAGACCTCGGTGCAATGAAACAT
TCTCCAGGCCTATCTAGAGATCTCATGTATTTCTCTGGTGCTACTGGAGAAAATGGAATTGAGCAGTCCT
GGTTTCCAGCAGTGGGCCATGAAAGACAAGAAGAGGCGAGGAAGTTTGATATTCCTAGCATGGAATCTAC
CCTCAATCAGTCGGCAATGATGGAGACACTTTATTCAGATCCTCACCACCGAGTCCGCTTCCACAACCCA
AGAACCAGCACAAGTAAGGAGTTGTACAGAGTGTTGCCTGAGGCCAAGAAGGCACCGGGCAGCGGGGCAG
TGTTTGAGCGGAATGGACCACATTCTAATAGCAGTGGGGTCCTCCCTTTGGGACTCCAGCCTGCTCCCGG
GCTCTCCAAGCCTCTGCCCTCTCAGGTGTGGCAGCCGAGTCCTGACACTTGGCATCCCCGAGAGCAATCT
TGTGAACTCAGCACTTGTCGGCAGCAGCTGGAATTGATTCGTTTACAGATGGAGCAAATGCAGCTTCAGA
ATGGAGCCATCTGCCACCATCCTGCTGCTTTTGGTCCTTCACTGCCCATCTTAGAGCCAGCACAGTGGAT
CAGCATCTTGAACAGTAATGAACACCTTCTGAAGGAAAAAGAGCTTCTCATTGACAAGCAGAGGAAACAC
ATCTCTCAGCTGGAGCAGAAAGTGCGAGAGAGCGAACTGCAAGTCCACAGTGCCCTCTTGGGCCGCCCTG
CCCCCTTTGGTGATGTCTGCTTGCTGAGGCTACAGGAATTGCAGCGAGAAAACACTTTCTTACGTGCACA
GTTTGCACAGAAGACAGAAGCCTTGAGCAGAGAAAAGATTGACCTTGAAAAGAAACTCTCTGCTTCTGAA
GTTGAAGTCCAGCTCATCAGAGAGTCGCTCAAAGTGGCGTTGCAGAAGCATTCTGAGGAAGTGAAGAAAC
AGGAAGAAAGGGTCAAAGGTCGTGATAAACATATCAATAATTTGAAAAAGAAATGCCAGAAGGAATCAGA
GCAGAACCGGGAGAAGCAGCAGCGTATTGAGACCTTGGAGCGCTACCTGGCTGACCTGCCCACACTGGAA
GACCATCAGAAGCAGAGCCAGCAGCTTAAGGATTCTGAGTTGAAGAGCACAGAGCTGCAGGAGAAAGTGA
CTGAGCTGGAGAGTTTGCTGGAGGAGACCCAGGCAATCTGCAGAGAGAAGGAGATTCAACTGGAAAGCCT
GAGGCAGAGAGAAGCAGAATTCTCCTCCGCTGGACATAGCCTGCAAGATAAACAGTCTGTGGAGGAGACC
AGTGGAGAAGGTCCAGAAGTGGAAATGGAGTCCTGGCAGAAGCGATACGATTCGCTCCAAAAGATTGTGG
AGAAGCAGCAGCAGAAGATGGATCAGTTGCGCTCACAAGTACAGAGCCTAGAGCAGGAAGTGGCTCAAGA
AGAAGGAACAAGCCAGGCCCTGAGAGAGGAGGCCCAGCGAAGGGATTCAGCCCTGCAGCAGCTGCGCACA
GCCGTGAAGGAGCTTTCAGTGCAAAACCAGGACTTGATTGAGAAGAATCTGACACTCCAGGAACACCTGC
GCCAGGCCCAACCAGGGTCTCCACCTTCACCAGACACGGCCCAGCTGGCACTTGAGCTGCACCAGGAGTT
GGCCAGTTGCCTTCAAGATCTGCAGGCTGTCTGTAGCATTGTGACCCAGAGGGCCCAGGGCCATGACCCC
AATCTCTCCCTGCTCCTGGGCATTCACTCACAGCACCCAGAGACTCAGCTAGATTTGCAGAAGCCAGATG
TGATCAAGAGGAAACTAGAAGAGGTTCAACAGCTGCGTCGTGACATTGAGGACTTAAGGACCACCATGTC
AGACAGATATGCCCAGGACATGGGAGAAAACTGTGTCACACAGTGA

Translation (761 aa):
MAMQEKYPTEGISHVTSPSSDVIQKGSSLGTEWQTPVISEPFRSRFSRCSSVADSGDTAIGTSCSDIAED
FCSSSGSPPFQPIKSHVTIPTAHVMPSTLGTSPAKPNSTPVGPSSSKLPLSGLAESVGMTRNGDLGAMKH
SPGLSRDLMYFSGATGENGIEQSWFPAVGHERQEEARKFDIPSMESTLNQSAMMETLYSDPHHRVRFHNP
RTSTSKELYRVLPEAKKAPGSGAVFERNGPHSNSSGVLPLGLQPAPGLSKPLPSQVWQPSPDTWHPREQS
CELSTCRQQLELIRLQMEQMQLQNGAICHHPAAFGPSLPILEPAQWISILNSNEHLLKEKELLIDKQRKH
ISQLEQKVRESELQVHSALLGRPAPFGDVCLLRLQELQRENTFLRAQFAQKTEALSREKIDLEKKLSASE
VEVQLIRESLKVALQKHSEEVKKQEERVKGRDKHINNLKKKCQKESEQNREKQQRIETLERYLADLPTLE
DHQKQSQQLKDSELKSTELQEKVTELESLLEETQAICREKEIQLESLRQREAEFSSAGHSLQDKQSVEET
SGEGPEVEMESWQKRYDSLQKIVEKQQQKMDQLRSQVQSLEQEVAQEEGTSQALREEAQRRDSALQQLRT
AVKELSVQNQDLIEKNLTLQEHLRQAQPGSPPSPDTAQLALELHQELASCLQDLQAVCSIVTQRAQGHDP
NLSLLLGIHSQHPETQLDLQKPDVIKRKLEEVQQLRRDIEDLRTTMSDRYAQDMGENCVTQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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