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Report for CCDS81012.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81012.1 Public Mus musculus 9 Celf6 23 108 98 CCDS HistoryNCBI Gene:76183Re-query CCDS DB by CCDS ID:81012.1Re-query CCDS DB by GeneID:76183See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81012.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000118164.2 ENSMUSP00000112403.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000118164.2Link to Ensembl Protein Viewer:ENSMUSP00000112403.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000118164Re-query CCDS DB by Protein ID:ENSMUSP00000112403
Original member NCBI NM_001311092.2 NP_001298021.1 Updated not alive Link to Nucleotide Sequence:NM_001311092.2Link to Protein Sequence:NP_001298021.1Re-query CCDS DB by Nucleotide ID:NM_001311092Re-query CCDS DB by Protein ID:NP_001298021
Current member NCBI NM_001311092.3 NP_001298021.1 Accepted alive Link to Nucleotide Sequence:NM_001311092.3Link to Protein Sequence:NP_001298021.1Re-query CCDS DB by Nucleotide ID:NM_001311092Re-query CCDS DB by Protein ID:NP_001298021Link to BLAST:NP_001298021.1

Chromosomal Locations for CCDS 81012.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 59590635 59590683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 59602577 59602705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 59602800 59602879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 59602995 59603138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 59603235 59603367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 59603448 59603597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 59604133 59604210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 59604300 59604443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 59604957 59605084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1035 nt):
ATGAATCGTCCGATCCAAGTGAAGCCGGCTGCCAGTGAGGGCCGAGGAGAGGACCGGAAGCTGTTTGTGG
GGATGTTGGGCAAGCAGCAGGGTGAGGAGGATGTCAGACGTCTGTTCCAGCCCTTCGGCCATATCGAGGA
GTGCACTGTCCTGCGGAGTCCGGACGGTACCAGTAAAGGCTGTGCCTTTGTGAAATTCGGAAGTCAAGGG
GAAGCCCAAGCTGCCATCCAGGGACTACACGGTAGCCGGACAATGACGGGTGCCTCCTCCAGCCTGGTGG
TTAAGCTGGCAGACACCGACCGGGAGCGCGCGCTGCGAAGGATGCAGCAAATGGCTGGCCAGCTGGGTGC
CTTCCACCCGGCACCGCTGCCCCTCGGGGCCTGTGGCGCCTATACCACTGCGATCCTACAGCACCAGGCA
GCGTTGCTGGCCGCAGCGCAGGGTCCGGGGTTAGGCCAGGTGGCCGCGGTGGCCGCCCAGATGCAGCACG
TGGCGGCCTTCAGCTTGGTGGCTGCACCGCTGTTGCCCGCGGCAGCCAATACATCCCCTGGTGGCAATGG
CCCTGGTGCACTCCCTGGCCTTCCAGCGCCCATGGGAGTCAATGGATTCGGCTCCTTGACCCCCCAGAGC
AACGGACAGCCAGGCTCCGACACGCTCTATAACAACGGGGTTTCCCCTTACCCAGCCTATCCCTCGGCCT
ATGCCCCAGCGAGCACAGCTTTTTCCCAACAGCCTTCAGCTCTGCCTCAACAACAAAGAGAAGGCCCCGA
AGGCTGTAACCTCTTCATCTATCACCTGCCTCAGGAGTTTGGGGATGCAGAACTCATACAGACATTCCTG
CCCTTCGGAGCTGTTGTCTCTGCCAAAGTTTTTGTGGACCGTGCCACCAATCAGAGCAAGTGTTTTGGGT
TTGTTAGTTTTGACAATCCAACCAGTGCCCAGACCGCCATCCAGGCCATGAATGGCTTTCAAATCGGCAT
GAAGAGGCTCAAGGTCCAGCTAAAGAGACCTAAGGATGCCAACAGGCCTTACTGA

Translation (344 aa):
MNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQG
EAQAAIQGLHGSRTMTGASSSLVVKLADTDRERALRRMQQMAGQLGAFHPAPLPLGACGAYTTAILQHQA
ALLAAAQGPGLGQVAAVAAQMQHVAAFSLVAAPLLPAAANTSPGGNGPGALPGLPAPMGVNGFGSLTPQS
NGQPGSDTLYNNGVSPYPAYPSAYAPASTAFSQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFL
PFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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