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Report for CCDS80916.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80916.1 Public Mus musculus 8 Prss54 23 108 98 CCDS HistoryNCBI Gene:70993Re-query CCDS DB by CCDS ID:80916.1Re-query CCDS DB by GeneID:70993See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 80916.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052690.12 ENSMUSP00000058859.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052690.12Link to Ensembl Protein Viewer:ENSMUSP00000058859.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000052690Re-query CCDS DB by Protein ID:ENSMUSP00000058859
Original member Current member NCBI NM_001310539.1 NP_001297468.1 Accepted alive Link to Nucleotide Sequence:NM_001310539.1Link to Protein Sequence:NP_001297468.1Re-query CCDS DB by Nucleotide ID:NM_001310539Re-query CCDS DB by Protein ID:NP_001297468Link to BLAST:NP_001297468.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001297468.1 383 Q7M756 383 99.7389% 0 1

Chromosomal Locations for CCDS 80916.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 95559292 95559822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95564350 95564478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95565458 95565716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95571008 95571179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95575137 95575197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1152 nt):
ATGGCAGAGATGCGAGGGATGCTGCTGATGCTGCTGTACATATCCCACTCGTCATCTGCCATTTGCGGCA
TCCAGAAAGCCACCATCGCGGACAAGTTAAAGGAGAACCTCGTGAGCAGCACCGAGTTCCCCTGGGTGGT
GTCCATCCAGGACAAGCAGTACACCCACCTGGCTTTCGGCTGCATTCTCAGCGAGTTCTGGATCCTCAGC
ACCGCCTCCGCTCTCCAGCACAGGAAGGAGGTTATTGCTGTTGTTGGTATATCTAACATGGATCCCCGAA
AGACTGACCACAGAGAGTATTCAGTCAATACCATCATCCCCCATGAGAACTTTGACAACGTCTCAATGGG
CAATAACATAGCCCTCCTGAAGACAGAATCCGCCATGCATTTCAACGACCTGGTCCAGGCCATCTGCTTC
CTGGGCAAAAAGCTACATAAGCCACCAGCCTTGAAGAACTGCTGGGTAGCAGGATGGAATCCCACGTCTG
CAACAGGAAATCACATGACAATGAGTATCCTGAGGAGAATCTCCGTGAAGGACATTGAAGTGTGTCCCTT
ACGTAGACACCAGAAAACAGAATGTGCCAGTCACACAAAGGAACCCAACAATGTTTGCCTGGGGGAACCA
GGAAGCCCTATGATGTGCCAGGCAAAGAAGCTGGATCTCTGGATCCTGAGAGGACTCCTGGCCTATGGAG
GCGACTCGTGCCCTGGCCTGTTTCTGTACACCAGTGTGGCAGACTACAGCGACTGGATCACGGCCAAGAC
GAGGAAGGCTGGCCCTTCCCTGTCCTCGCTCCACCTCTGGGAGAAGTTGGTCTTTGAGCTCCCCTTTCAC
GAATCAAATATTGCCCTGACAACGAATTCGTTTTCTATACATACCTATGCTGAATGGCCCCACTCCTACT
CCCAAGGGCAAAGAATGTCCACTAAGTCCAACAAGCAGAAGGATGCTGGGCAGAACTTCAGGGTAAACAG
GCAACCGGAAACCAGCGGGCCTTCGAAGGTGGCTATTCAGCCCATGTACTACGACTACTACGGTGGGGAG
GCAGGGGAAGGTGGGGCTGTGGCTGGCCAGAACAGGCTGCATTGGTCTCAAGAAAGGATCTTGATGTCCT
TCGTGCTTGTTTTCTTGGGCAGCGGAGTCTAG

Translation (383 aa):
MAEMRGMLLMLLYISHSSSAICGIQKATIADKLKENLVSSTEFPWVVSIQDKQYTHLAFGCILSEFWILS
TASALQHRKEVIAVVGISNMDPRKTDHREYSVNTIIPHENFDNVSMGNNIALLKTESAMHFNDLVQAICF
LGKKLHKPPALKNCWVAGWNPTSATGNHMTMSILRRISVKDIEVCPLRRHQKTECASHTKEPNNVCLGEP
GSPMMCQAKKLDLWILRGLLAYGGDSCPGLFLYTSVADYSDWITAKTRKAGPSLSSLHLWEKLVFELPFH
ESNIALTTNSFSIHTYAEWPHSYSQGQRMSTKSNKQKDAGQNFRVNRQPETSGPSKVAIQPMYYDYYGGE
AGEGGAVAGQNRLHWSQERILMSFVLVFLGSGV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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