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Report for CCDS80910.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80910.1 Public Mus musculus 8 Mylk3 23 108 98 CCDS HistoryNCBI Gene:213435Re-query CCDS DB by CCDS ID:80910.1Re-query CCDS DB by GeneID:213435See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80910.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000122452.7 ENSMUSP00000113389.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000122452.7Link to Ensembl Protein Viewer:ENSMUSP00000113389.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000122452Re-query CCDS DB by Protein ID:ENSMUSP00000113389
Original member Current member NCBI NM_001297612.1 NP_001284541.1 Accepted alive Link to Nucleotide Sequence:NM_001297612.1Link to Protein Sequence:NP_001284541.1Re-query CCDS DB by Nucleotide ID:NM_001297612Re-query CCDS DB by Protein ID:NP_001284541Link to BLAST:NP_001284541.1

Chromosomal Locations for CCDS 80910.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 85325461 85325520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85327148 85327280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85328531 85328683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85336368 85336496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85342657 85342727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85350363 85350504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85351963 85352072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85352837 85352930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85353561 85353666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85355167 85355567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85358915 85359323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85360480 85360573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85380859 85380945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1989 nt):
ATGGGAACTCTGTGCCCTGTCCCAGCACTGTGCAGGCCCAGCACCAGAGGCCAGCAGCGGGCATCAGATT
ACACCCAGATATTTGCGAACAAGGAGCAAGCAGAAGTTGCTGGAGTGAAGCCAAACCATGTACTGACTAC
AGGAGGTGTGCAAGCTGACGCCTCTAGGACGCTGTGGGAAGAGAGCCAAAAGGAGGACATACCTGTGCGA
ACAGTGGAGGGGCTGCCTCTCATCATCAATACGTCACTGAAGGGAGCTGACCTAACCCAGGCAGGAGCCT
CACTGAGGCAGGGAGTTGAAGTTCTTGGCCCAGGCCAAGTACCCCTACCCACAGAAGCAGAATCCAGGCT
TCCTGAGACAGCCAGTGAGAACACTGGAGCCACCCTGGAATTGTCCGTAGCAATCGACAGAATCAGCGAG
GTCCTCACTAGCCTCAAGATGTCACAAGGTGGTGGTCAAGAAACCTCATCCAGCAAGCCTGACTGTTGGC
TTTCAGAAGAGGCCATGAGGCTGAGTTCAGGGCCTCTCCCTCAGCCCCTAGGACCACTAACTCCAGACAG
TGACATTCACAGTGGTGATGCACTTCCCAGGATCCCTATCAATATGCAAGAGATGGCTACTCCTGGGGAG
TTGCTTGAGACCCAAAGTGGCAGTCCCATTGGCTCTGCAGAAGCTCCAGGCCTTGGGACTGTGTTAGAAG
ACCAGATCCCTAAAGGAGCCAGACCATTTCCACCCCTGCCAAAGAGGAGCAGCAACAATGGTGGCATGAG
TGCAGAGGAGGAGATAGGGTCTGGGGCTGAGCCTATGAGAGGACCAAGCTTGGCTACAAGGGACTGGAGA
GATGAGACTGTTGGGACCACAGACCTGCAGCAAGGCATAGACCCAGGAGCAGTGAGCCCTGAGCCTGGGA
AGGACCACGCAGCCCAGGGCCCAGGAAGAACTGAAGCTGGAAGGCTATCTTCTGCTGCAGAGGCTGCCAT
TGTGGTTCTAGATGACAGCGCAGCACCCCCAGCCCCTTTTGAACACCGGGTAGTGAGCATCAAAGATACC
CTGATCTCAGCAGGCTACACGGTATCCCAACATGAAGTCTTAGGAGGGGGTCGGTTTGGCCAGGTGCACA
GGTGTACAGAGAGGTCTACAGGCCTTGCACTGGCAGCCAAGATCATCAAAGTGAAGAACGTAAAGGACCG
GGAGGATGTGAAGAATGAGGTCAACATCATGAACCAGCTCAGCCACGTAAACTTGATCCAACTTTATGAT
GCGTTTGAGAGCAAGAGCAGCTTCACTCTGATCATGGAGTATGTGGATGGAGGCGAACTCTTTGACCGGA
TCACGGATGAGAAGTACCACCTCACTGAGTTGGATGTGGTCTTGTTCACGAGGCAGATCTGTGAGGGTGT
GCATTACCTGCATCAGCACTATATCCTGCACCTGGACCTCAAGCCTGAGAACATATTGTGTGTCAGCCAG
ACAGGGCATCAAATTAAGATCATTGACTTTGGGCTGGCTAGAAGATACAAGCCTCGGGAGAAGCTAAAGG
TGAACTTTGGTACTCCGGAGTTCCTGGCCCCAGAAGTTGTTAACTATGAGTTTGTGTCATTTCCAACAGA
CATGTGGAGTGTGGGAGTTATCACCTACATGCTACTCAGTGGTTTGTCCCCATTTCTAGGGGAGACAGAT
GCAGAGACCATGAATTTTATTGTGAACTGCAGCTGGGATTTCGATGCTGATACCTTCAAAGGGCTGTCGG
AGGAAGCCAAGGACTTTGTTTCCCGGTTACTGGTCAAAGAGAAGAGCTGTAGGATGAGCGCCACACAGTG
CCTGAAACACGAGTGGTTAAGTCACCTGCCTGCCAAAGCCTCGGGCTCCAACGTTCGCCTCAGATCCCAA
CAACTGCTGCAGAAATATATGGCTCAGAGTAAATGGAAGAAACATTTCCACGTGGTGACTGCAGTCAACA
GGCTACGGAAATTTCCAACGTGTCCCTAA

Translation (662 aa):
MGTLCPVPALCRPSTRGQQRASDYTQIFANKEQAEVAGVKPNHVLTTGGVQADASRTLWEESQKEDIPVR
TVEGLPLIINTSLKGADLTQAGASLRQGVEVLGPGQVPLPTEAESRLPETASENTGATLELSVAIDRISE
VLTSLKMSQGGGQETSSSKPDCWLSEEAMRLSSGPLPQPLGPLTPDSDIHSGDALPRIPINMQEMATPGE
LLETQSGSPIGSAEAPGLGTVLEDQIPKGARPFPPLPKRSSNNGGMSAEEEIGSGAEPMRGPSLATRDWR
DETVGTTDLQQGIDPGAVSPEPGKDHAAQGPGRTEAGRLSSAAEAAIVVLDDSAAPPAPFEHRVVSIKDT
LISAGYTVSQHEVLGGGRFGQVHRCTERSTGLALAAKIIKVKNVKDREDVKNEVNIMNQLSHVNLIQLYD
AFESKSSFTLIMEYVDGGELFDRITDEKYHLTELDVVLFTRQICEGVHYLHQHYILHLDLKPENILCVSQ
TGHQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYEFVSFPTDMWSVGVITYMLLSGLSPFLGETD
AETMNFIVNCSWDFDADTFKGLSEEAKDFVSRLLVKEKSCRMSATQCLKHEWLSHLPAKASGSNVRLRSQ
QLLQKYMAQSKWKKHFHVVTAVNRLRKFPTCP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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