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Report for CCDS7758.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7758.1 Public Homo sapiens 11 UBQLN3 24 110 108 CCDS HistoryNCBI Gene:50613Re-query CCDS DB by CCDS ID:7758.1Re-query CCDS DB by GeneID:50613See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7758.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311659.5 ENSP00000347997.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311659.5Link to Ensembl Protein Viewer:ENSP00000347997.2Re-query CCDS DB by Nucleotide ID:ENST00000311659Re-query CCDS DB by Protein ID:ENSP00000347997
Original member Current member NCBI NM_001347096.2 NP_001334025.1 Accepted alive Link to Nucleotide Sequence:NM_001347096.2Link to Protein Sequence:NP_001334025.1Re-query CCDS DB by Nucleotide ID:NM_001347096Re-query CCDS DB by Protein ID:NP_001334025Link to BLAST:NP_001334025.1
Original member Current member NCBI NM_017481.4 NP_059509.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017481.4Link to Protein Sequence:NP_059509.1Re-query CCDS DB by Nucleotide ID:NM_017481Re-query CCDS DB by Protein ID:NP_059509Link to BLAST:NP_059509.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001334025.1 655 Q9H347 655 100% 0 0
NP_059509.1 655 Q9H347 655 100% 0 0

Chromosomal Locations for CCDS 7758.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 5507591 5509558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1968 nt):
ATGGCCAAAGGTGGAGAAGCCCTGCCACAGGGCAGCCCAGCACCAGTCCAGGATCCCCACCTCATCAAGG
TGACAGTGAAGACGCCCAAAGACAAGGAGGATTTCTCAGTTACAGACACATGCACTATCCAGCAGCTGAA
GGAAGAGATATCTCAGCGCTTTAAGGCCCACCCCGATCAGCTTGTTCTAATCTTTGCTGGCAAAATCCTC
AAGGATCCTGACTCACTGGCACAGTGTGGAGTGCGAGATGGCCTCACTGTCCACCTGGTCATCAAGAGGC
AGCACCGTGCCATGGGCAATGAGTGCCCAGCTGCCTCTGTCCCTACCCAGGGCCCAAGTCCTGGATCACT
CCCTCAGCCAAGCTCCATTTACCCAGCAGATGGGCCCCCTGCCTTTAGCTTAGGTCTCCTCACAGGCCTC
AGTAGGCTGGGCTTGGCCTATCGTGGCTTCCCTGACCAGCCAAGCTCCCTGATGCGGCAGCATGTGTCTG
TGCCTGAGTTTGTGACTCAGCTCATTGATGACCCCTTCATCCCGGGTCTGCTGTCCAACACAGGCCTAGT
ACGCCAGCTGGTTCTTGACAACCCCCATATGCAGCAGCTGATCCAGCACAACCCTGAGATTGGGCATATT
CTTAACAACCCGGAAATTATGCGGCAGACACTGGAGTTTTTACGTAACCCTGCCATGATGCAGGAGATGA
TACGTAGCCAGGACCGGGTGCTCAGTAACTTGGAGAGCATTCCTGGTGGCTACAATGTGCTTTGCACTAT
GTACACAGATATTATGGACCCAATGCTTAACGCAGTCCAGGAGCAGTTTGGCGGCAATCCCTTTGCCACT
GCCACTACTGATAATGCCACCACCACCACCAGCCAACCTTCAAGGATGGAGAATTGTGACCCTCTCCCCA
ACCCCTGGACTTCCACACATGGAGGCTCAGGTAGCAGGCAAGGAAGGCAGGATGGGGATCAGGATGCACC
TGACATTAGAAATAGGTTTCCAAACTTTCTGGGTATTATAAGGCTCTATGACTATCTCCAGCAATTACAC
GAGAACCCCCAGTCCCTAGGAACTTATCTACAGGGGACTGCATCTGCCCTCAGCCAAAGCCAGGAACCAC
CACCATCAGTAAACAGAGTTCCCCCATCGTCACCCTCATCTCAGGAGCCTGGGTCAGGCCAGCCTCTCCC
CGAGGAGTCAGTAGCAATCAAGGGAAGGTCCTCCTGCCCAGCTTTCCTGAGATACCCCACAGAGAACAGT
ACTGGACAAGGTGGAGACCAAGATGGTGCAGGGAAAAGCTCTACTGGACATAGCACAAACTTGCCTGATC
TTGTCTCGGGGCTGGGAGATTCTGCCAACAGGGTTCCATTTGCTCCCTTATCTTTTTCCCCCACGGCAGC
CATTCCTGGAATCCCTGAGCCTCCCTGGCTGCCATCCCCGGCTTATCCAAGATCTCTGAGGCCAGATGGC
ATGAATCCAGCTCCACAGTTACAGGATGAGATACAACCACAGCTGCCACTGCTGATGCACCTTCAGGCAG
CCATGGCAAACCCCCGTGCCCTGCAAGCCCTGCGGCAGATTGAGCAGGGTCTACAGGTCCTAGCTACTGA
AGCACCTCGCCTCCTACTCTGGTTCATGCCTTGCCTAGCAGGGACGGGTAGTGTGGCAGGAGGTATAGAG
TCTAGAGAAGATCCCCTTATGTCTGAGGATCCTCTCCCAAATCCACCTCCTGAGGTGTTCCCAGCACTGG
ACTCTGCAGAGCTGGGCTTCCTTTCCCCTCCCTTTCTCCATATGCTGCAAGATTTAGTTAGTACAAATCC
CCAGCAGCTGCAGCCTGAGGCTCACTTTCAGGTGCAGCTGGAGCAACTGCGGTCCATGGGCTTTCTGAAT
CGTGAAGCCAATCTTCAGGCCCTCATTGCTACGGGGGGCGACGTGGATGCTGCTGTGGAGAAGCTGAGAC
AGTCGTAG

Translation (655 aa):
MAKGGEALPQGSPAPVQDPHLIKVTVKTPKDKEDFSVTDTCTIQQLKEEISQRFKAHPDQLVLIFAGKIL
KDPDSLAQCGVRDGLTVHLVIKRQHRAMGNECPAASVPTQGPSPGSLPQPSSIYPADGPPAFSLGLLTGL
SRLGLAYRGFPDQPSSLMRQHVSVPEFVTQLIDDPFIPGLLSNTGLVRQLVLDNPHMQQLIQHNPEIGHI
LNNPEIMRQTLEFLRNPAMMQEMIRSQDRVLSNLESIPGGYNVLCTMYTDIMDPMLNAVQEQFGGNPFAT
ATTDNATTTTSQPSRMENCDPLPNPWTSTHGGSGSRQGRQDGDQDAPDIRNRFPNFLGIIRLYDYLQQLH
ENPQSLGTYLQGTASALSQSQEPPPSVNRVPPSSPSSQEPGSGQPLPEESVAIKGRSSCPAFLRYPTENS
TGQGGDQDGAGKSSTGHSTNLPDLVSGLGDSANRVPFAPLSFSPTAAIPGIPEPPWLPSPAYPRSLRPDG
MNPAPQLQDEIQPQLPLLMHLQAAMANPRALQALRQIEQGLQVLATEAPRLLLWFMPCLAGTGSVAGGIE
SREDPLMSEDPLPNPPPEVFPALDSAELGFLSPPFLHMLQDLVSTNPQQLQPEAHFQVQLEQLRSMGFLN
REANLQALIATGGDVDAAVEKLRQS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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