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Report for CCDS76522.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76522.1 Public Homo sapiens 12 MFAP5 24 110 108 CCDS HistoryNCBI Gene:8076Re-query CCDS DB by CCDS ID:76522.1Re-query CCDS DB by GeneID:8076See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76522.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000543369.5 ENSP00000441492.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000543369.5Link to Ensembl Protein Viewer:ENSP00000441492.1Re-query CCDS DB by Nucleotide ID:ENST00000543369Re-query CCDS DB by Protein ID:ENSP00000441492
Original member Current member NCBI NM_001297710.2 NP_001284639.1 Accepted alive Link to Nucleotide Sequence:NM_001297710.2Link to Protein Sequence:NP_001284639.1Re-query CCDS DB by Nucleotide ID:NM_001297710Re-query CCDS DB by Protein ID:NP_001284639Link to BLAST:NP_001284639.1

Chromosomal Locations for CCDS 76522.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 8648091 8648203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8649501 8649574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8650502 8650589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8654437 8654481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8655415 8655447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8655786 8655830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8662047 8662104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (456 nt):
ATGTCGCTCTTGGGACCCAAGGTGCTGCTGTTTCTTGCTGCATTCATCATCACCTCTGACGATGTGACTC
AAGCGACTCCAGAAACATTCACAGAAGATCCTAATCTGGTGAATGATCCCGCTACAGATGAAACAGTTTT
GGCTGTTTTGGCTGATATTGCACCTTCCACAGATGACTTGGAGTGCTGGGATGAGAAATTTACCTGCACA
AGGCTCTACTCTGTGCATCGGCCGGTTAAACAATGCATTCATCAGTTATGCTTCACCAGTTTACGACGTA
TGTACATCGTCAACAAGGAGATCTGCTCTCGTCTTGTCTGTAAGGAACACGAAGCTATGAAAGATGAGCT
TTGCCGTCAGATGGCTGGTCTGCCCCCTAGGAGACTCCGTCGCTCCAATTACTTCCGACTTCCTCCCTGT
GAAAATGTGGATTTGCAGAGACCCAATGGTCTGTGA

Translation (151 aa):
MSLLGPKVLLFLAAFIITSDDVTQATPETFTEDPNLVNDPATDETVLAVLADIAPSTDDLECWDEKFTCT
RLYSVHRPVKQCIHQLCFTSLRRMYIVNKEICSRLVCKEHEAMKDELCRQMAGLPPRRLRRSNYFRLPPC
ENVDLQRPNGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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