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Report for CCDS76210.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76210.1 Public Homo sapiens 1 PLEKHO1 24 110 108 CCDS HistoryNCBI Gene:51177Re-query CCDS DB by CCDS ID:76210.1Re-query CCDS DB by GeneID:51177See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76210.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369126.5 ENSP00000358122.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369126.5Link to Ensembl Protein Viewer:ENSP00000358122.1Re-query CCDS DB by Nucleotide ID:ENST00000369126Re-query CCDS DB by Protein ID:ENSP00000358122
Original member Current member NCBI NM_001304724.2 NP_001291653.1 Accepted alive Link to Nucleotide Sequence:NM_001304724.2Link to Protein Sequence:NP_001291653.1Re-query CCDS DB by Nucleotide ID:NM_001304724Re-query CCDS DB by Protein ID:NP_001291653Link to BLAST:NP_001291653.1

Chromosomal Locations for CCDS 76210.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 150158843 150159523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (681 nt):
ATGCTGACCTTGGACTTGATCCAAGAGGAAGACCCTTCCCCTGAGGAACCAACCTCTTGTGCTGAGAGCT
TTCGGGTTGACCTGGACAAGTCTGTGGCCCAGCTGGCAGGGAGCCGGCGGAGAGCGGACTCAGACCGCAT
CCAGCCCTCCGCAGACCGGGCAAGCAGTCTCTCCCGACCTTGGGAAAAAACAGACAAAGGGGCCACCTAC
ACCCCCCAGGCACCCAAGAAGTTGACGCCCACAGAGAAAGGCCGCTGCGCCTCCCTGGAGGAGATCCTAT
CTCAGCGGGATGCTGCCTCTGCCCGCACCCTCCAGCTGCGGGCTGAGGAACCCCCAACCCCTGCCCTCCC
CAACCCGGGGCAGCTGTCCCGGATCCAGGACCTGGTAGCAAGGAAACTGGAGGAGACTCAGGAGCTTCTG
GCAGAGGTTCAGGGACTGGGAGATGGGAAGCGAAAGGCCAAGGACCCCCCTCGGTCTCCGCCGGATTCTG
AGTCAGAGCAGCTGCTGCTGGAGACGGAACGGCTGCTGGGAGAGGCATCATCGAATTGGAGCCAGGCAAA
GAGGGTGCTGCAGGAGGTCAGGGAGCTGAGAGACCTGTACAGACAGATGGACCTGCAGACCCCGGACTCC
CACCTCAGACAGACCACCCCGCACAGTCAGTACCGGAAGAGCCTGATGTGA

Translation (226 aa):
MLTLDLIQEEDPSPEEPTSCAESFRVDLDKSVAQLAGSRRRADSDRIQPSADRASSLSRPWEKTDKGATY
TPQAPKKLTPTEKGRCASLEEILSQRDAASARTLQLRAEEPPTPALPNPGQLSRIQDLVARKLEETQELL
AEVQGLGDGKRKAKDPPRSPPDSESEQLLLETERLLGEASSNWSQAKRVLQEVRELRDLYRQMDLQTPDS
HLRQTTPHSQYRKSLM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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