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Report for CCDS7584.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7584.1 Public Homo sapiens 10 DCLRE1A 24 110 108 CCDS HistoryNCBI Gene:9937Re-query CCDS DB by CCDS ID:7584.1Re-query CCDS DB by GeneID:9937See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7584.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361384.7 ENSP00000355185.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361384.7Link to Ensembl Protein Viewer:ENSP00000355185.2Re-query CCDS DB by Nucleotide ID:ENST00000361384Re-query CCDS DB by Protein ID:ENSP00000355185
Original member Current member EBI ENST00000369305.1 ENSP00000358311.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369305.1Link to Ensembl Protein Viewer:ENSP00000358311.1Re-query CCDS DB by Nucleotide ID:ENST00000369305Re-query CCDS DB by Protein ID:ENSP00000358311
Original member Current member NCBI NM_001271816.2 NP_001258745.1 Accepted alive Link to Nucleotide Sequence:NM_001271816.2Link to Protein Sequence:NP_001258745.1Re-query CCDS DB by Nucleotide ID:NM_001271816Re-query CCDS DB by Protein ID:NP_001258745Link to BLAST:NP_001258745.1
Original member Current member NCBI NM_014881.5 NP_055696.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014881.5Link to Protein Sequence:NP_055696.3Re-query CCDS DB by Nucleotide ID:NM_014881Re-query CCDS DB by Protein ID:NP_055696Link to BLAST:NP_055696.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258745.1 1040 Q6PJP8 1040 100% 0 0
NP_055696.3 1040 Q6PJP8 1040 100% 0 0

Chromosomal Locations for CCDS 7584.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 113835152 113835312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113837062 113837203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113841406 113841560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113842343 113842488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113844104 113844244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113845685 113845803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113847202 113847335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113848980 113850644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 113852723 113853182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3123 nt):
ATGTTAGAAGACATTTCCGAAGAAGACATTTGGGAATACAAATCTAAAAGAAAACCAAAACGAGTTGATC
CAAATAATGGCTCTAAAAATATTCTAAAATCTGTTGAAAAAGCAACAGATGGAAAATACCAGTCAAAACG
GAGTAGAAACAGAAAAAGAGCCGCAGAAGCTAAAGAGGTGAAGGACCATGAAGTGCCCCTTGGAAATGCA
GGTTGTCAGACTTCTGTTGCTTCTAGTCAGAATTCAAGTTGTGGAGATGGTATTCAGCAGACCCAAGACA
AGGAAACTACTCCAGGAAAACTCTGTAGAACTCAAAAAAGCCAACACGTGTCCCCAAAGATACGTCCAGT
TTATGATGGATACTGTCCAAATTGCCAGATGCCTTTTTCCTCATTGATAGGGCAGACACCTCGATGGCAT
GTTTTTGAATGTTTGGATTCTCCACCACGCTCTGAAACAGAGTGTCCTGATGGTCTTCTGTGTACCTCAA
CCATTCCTTTTCATTACAAGAGATACACTCACTTCCTGCTAGCTCAAAGCAGGGCTGGTGATCATCCTTT
TAGCAGCCCATCACCTGCGTCAGGTGGCAGTTTCAGTGAGACTAAGTCAGGCGTCCTTTGTAGCCTTGAG
GAAAGATGGTCTTCGTATCAGAACCAAACTGATAACTCGGTTTCAAATGATCCCTTATTGATGACACAGT
ATTTTAAAAAGTCTCCGTCTCTGACTGAAGCCAGTGAAAAGATTTCTACTCATATCCAAACATCCCAACA
AGCTCTACAATTTACAGATTTTGTTGAGAATGACAAACTAGTGGGAGTTGCTTTGCGTCTTGCAAACAAC
TCAGAACACATAAATTTGCCATTGCCAGAAAATGACTTCAGTGACTGTGAAATCTCCTATTCTCCACTTC
AAAGTGATGAAGACACTCATGATATCGATGAAAAACCGGATGATTCACAAGAACAACTGTTTTTTACCGA
AAGCTCAAAAGATGGCAGCCTCGAAGAAGATGATGACAGCTGTGGTTTTTTTAAAAAACGACATGGTCCC
TTACTGAAGGACCAGGATGAGAGCTGCCCCAAAGTGAACAGCTTCTTAACTCGGGATAAGTATGATGAAG
GATTGTATAGATTCAATAGTCTAAATGATTTGTCTCAACCTATTTCTCAAAATAATGAGAGTACTTTGCC
TTATGATCTGGCATGTACTGGTGGTGATTTTGTGTTGTTTCCACCTGCATTGGCAGGGAAGCTTGCTGCT
TCTGTTCATCAGGCAACTAAAGCAAAACCTGATGAGCCAGAATTTCACTCAGCTCAATCAAATAAACAGA
AACAGGTAATTGAAGAATCATCTGTTTACAATCAAGTTTCTCTTCCGTTAGTTAAGAGTTTAATGTTGAA
ACCTTTTGAAAGTCAGGTAGAAGGGTATCTTTCTTCCCAACCAACCCAAAATACAATTAGAAAATTATCA
AGTGAGAACTTGAATGCTAAGAATAATACTAACTCAGCATGTTTCTGCAGAAAGGCATTAGAGGGTGTGC
CAGTTGGTAAAGCTACAATTTTAAATACAGAAAACTTGTCTAGTACACCTGCTCCGAAGTATTTGAAAAT
ATTGCCTTCTGGTCTTAAGTATAATGCAAGACATCCTTCTACCAAGGTAATGAAGCAAATGGATATAGGT
GTGTATTTTGGACTACCTCCCAAAAGAAAGGAAGAGAAATTGCTAGGGGAAAGTGCATTAGAAGGGATAA
ACTTAAATCCAGTTCCAAGTCCTAATCAAAAGAGGTCCTCGCAGTGCAAGAGGAAAGCAGAAAAATCTTT
AAGTGATTTAGAATTTGATGCAAGTACTTTACATGAGAGTCAGCTTTCTGTGGAACTTTCTAGTGAGAGG
TCACAGCGTCAAAAAAAGAGATGTAGAAAGTCAAATTCACTGCAGGAAGGAGCGTGTCAGAAGAGATCAG
ATCACCTTATTAATACAGAATCTGAAGCAGTCAATTTAAGTAAAGTCAAAGTCTTCACAAAATCAGCTCA
TGGTGGGCTGCAAAGGGGCAACAAGAAAATCCCAGAGTCATCTAATGTAGGAGGATCAAGAAAAAAGACA
TGTCCATTCTATAAGAAAATACCTGGAACCGGCTTTACAGTTGATGCCTTTCAGTATGGCGTGGTTGAAG
GTTGCACAGCCTATTTTCTCACACATTTTCATTCTGATCATTATGCTGGATTGTCTAAACACTTCACATT
TCCAGTTTATTGTAGTGAGATAACTGGCAATTTGTTGAAGAACAAGCTTCATGTGCAAGAACAATATATT
CACCCATTGCCACTGGACACTGAATGTATTGTGAATGGTGTCAAAGTTGTTTTGCTTGATGCCAATCACT
GTCCAGGTGCTGTCATGATCCTCTTTTATCTTCCTAATGGTACTGTCATATTACACACGGGAGACTTCAG
AGCAGATCCCAGCATGGAACGTTCTCTTCTTGCGGACCAGAAAGTCCATATGCTGTACTTAGATACCACA
TATTGTAGCCCAGAATACACCTTTCCATCTCAGCAAGAGGTTATCCGGTTTGCCATCAACACTGCCTTTG
AGGCTGTAACTCTAAACCCACATGCTCTTGTTGTCTGTGGCACTTACTCTATTGGAAAAGAGAAAGTCTT
CCTAGCCATTGCTGATGTTTTAGGTTCAAAAGTGGGCATGTCCCAGGAAAAATATAAAACTCTACAGTGC
CTCAATATACCAGAAATTAATTCACTCATCACTACCGACATGTGCAGTTCATTGGTTCACCTTCTCCCAA
TGATGCAAATTAATTTTAAGGGCTTACAGAGTCATTTGAAGAAGTGTGGTGGGAAATACAATCAGATTTT
GGCATTTCGACCTACAGGATGGACACACTCTAACAAGTTCACTAGAATAGCAGATGTTATTCCCCAGACC
AAAGGAAACATTTCAATATATGGAATTCCTTACAGTGAACACAGCAGCTACCTAGAAATGAAGCGCTTTG
TCCAGTGGCTGAAGCCCCAGAAAATCATACCTACTGTAAATGTGGGCACCTGGAAATCTAGGAGCACAAT
GGAGAAATATTTTAGAGAGTGGAAATTGGAAGCTGGATATTGA

Translation (1040 aa):
MLEDISEEDIWEYKSKRKPKRVDPNNGSKNILKSVEKATDGKYQSKRSRNRKRAAEAKEVKDHEVPLGNA
GCQTSVASSQNSSCGDGIQQTQDKETTPGKLCRTQKSQHVSPKIRPVYDGYCPNCQMPFSSLIGQTPRWH
VFECLDSPPRSETECPDGLLCTSTIPFHYKRYTHFLLAQSRAGDHPFSSPSPASGGSFSETKSGVLCSLE
ERWSSYQNQTDNSVSNDPLLMTQYFKKSPSLTEASEKISTHIQTSQQALQFTDFVENDKLVGVALRLANN
SEHINLPLPENDFSDCEISYSPLQSDEDTHDIDEKPDDSQEQLFFTESSKDGSLEEDDDSCGFFKKRHGP
LLKDQDESCPKVNSFLTRDKYDEGLYRFNSLNDLSQPISQNNESTLPYDLACTGGDFVLFPPALAGKLAA
SVHQATKAKPDEPEFHSAQSNKQKQVIEESSVYNQVSLPLVKSLMLKPFESQVEGYLSSQPTQNTIRKLS
SENLNAKNNTNSACFCRKALEGVPVGKATILNTENLSSTPAPKYLKILPSGLKYNARHPSTKVMKQMDIG
VYFGLPPKRKEEKLLGESALEGINLNPVPSPNQKRSSQCKRKAEKSLSDLEFDASTLHESQLSVELSSER
SQRQKKRCRKSNSLQEGACQKRSDHLINTESEAVNLSKVKVFTKSAHGGLQRGNKKIPESSNVGGSRKKT
CPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTFPVYCSEITGNLLKNKLHVQEQYI
HPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFRADPSMERSLLADQKVHMLYLDTT
YCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQC
LNIPEINSLITTDMCSSLVHLLPMMQINFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVIPQT
KGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGTWKSRSTMEKYFREWKLEAGY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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