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Report for CCDS75752.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75752.1 Public Homo sapiens 8 C8orf89 24 110 108 CCDS HistoryNCBI Gene:100130301Re-query CCDS DB by CCDS ID:75752.1Re-query CCDS DB by GeneID:100130301See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75752.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000624510.4 ENSP00000485524.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000624510.4Link to Ensembl Protein Viewer:ENSP00000485524.1Re-query CCDS DB by Nucleotide ID:ENST00000624510Re-query CCDS DB by Protein ID:ENSP00000485524
Original member Current member NCBI NM_001243237.3 NP_001230166.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001243237.3Link to Protein Sequence:NP_001230166.1Re-query CCDS DB by Nucleotide ID:NM_001243237Re-query CCDS DB by Protein ID:NP_001230166Link to BLAST:NP_001230166.1
Original member Current member NCBI NM_001391993.1 NP_001378922.1 Accepted alive Link to Nucleotide Sequence:NM_001391993.1Link to Protein Sequence:NP_001378922.1Re-query CCDS DB by Nucleotide ID:NM_001391993Re-query CCDS DB by Protein ID:NP_001378922Link to BLAST:NP_001378922.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001230166.1 161 P0DMQ9 161 100% 0 0
NP_001378922.1 161 P0DMQ9 161 100% 0 0

Chromosomal Locations for CCDS 75752.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 73241457 73241605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 73250268 73250323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 73256973 73257126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 73259332 73259458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (486 nt):
ATGTCAGTGCTATCTCCTGAAATCAAATGTGAGACTTCTAAATTCACCAGAAGTTCCTTTGGCAGTTGTT
TGATTTTTGAGAGTAGTTGGAAGAAAGCAGTTTTAGAAACACAAAAGATTAAGAAAGAATATACCACAGC
ATTTGGTCTAGAAGAGCTCAAGGAATGTATCAAAATGCCATATTTACCAGGACTGCAAAGTTGCCAAAAA
AGTGTAAGTTCAACTCCACTAGAGGTTCCTAAAAGACTGCCACGTGCTGATGCCGAGGTGTCTGCAGTCA
GGCTAAAGAAGACTAAGGAGACATGCAGTGTGGCACCACTTTGGGAGAAATCAAAAGGTTCTGGCTTCAG
TGATCCTCTCACTGGAGCACCATCTCAATACTTAGAGAGACTTTCCAAAATAGCCATATTGGAATATGAT
ACCATTCGTCAGGAAACAACCACAAAATCAAAAAAAAGCAAGAAACGAGACCTCCGAGACCGCTGA

Translation (161 aa):
MSVLSPEIKCETSKFTRSSFGSCLIFESSWKKAVLETQKIKKEYTTAFGLEELKECIKMPYLPGLQSCQK
SVSSTPLEVPKRLPRADAEVSAVRLKKTKETCSVAPLWEKSKGSGFSDPLTGAPSQYLERLSKIAILEYD
TIRQETTTKSKKSKKRDLRDR


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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