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Report for CCDS75725.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75725.1 Public Homo sapiens 8 UBXN8 24 110 108 CCDS HistoryNCBI Gene:7993Re-query CCDS DB by CCDS ID:75725.1Re-query CCDS DB by GeneID:7993See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75725.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000615729.4 ENSP00000481635.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000615729.4Link to Ensembl Protein Viewer:ENSP00000481635.1Re-query CCDS DB by Nucleotide ID:ENST00000615729Re-query CCDS DB by Protein ID:ENSP00000481635
Original member Current member NCBI NM_001282189.2 NP_001269118.1 Accepted alive Link to Nucleotide Sequence:NM_001282189.2Link to Protein Sequence:NP_001269118.1Re-query CCDS DB by Nucleotide ID:NM_001282189Re-query CCDS DB by Protein ID:NP_001269118Link to BLAST:NP_001269118.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269118.1 233 O00124-3 233 100% 0 0

Chromosomal Locations for CCDS 75725.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 30744190 30744277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30751507 30751518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30753035 30753105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30754665 30754787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30756765 30756887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30760888 30760929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30763273 30763347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30766227 30766394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (702 nt):
ATGGCTTCACGTGGGGTTGTTGGCATTTTCTTCCTCTCTGCTGTCCCCCTTGTGTGTCTGGAGCTCCGGC
GTGGGATCCCGGATATAGTTTATCTGAAGGAAGAAGAAGAAAAGAATGAGAAAAGACAAAAACTTGTGAG
AAAAAAACAACAAGAAGCACAAGGAGAGAAGGCCAGCAGATACATAGAGAATGTTTTAAAACCTCACCAG
GAAATGAAATTGAGAAAACTGGAGGAGCGCTTTTATCAAATGACGGGTGAAGCCTGGAAATTAAGCAGTG
GTCACAAACTTGGGGGTGATGAAGGTACAAGTCAGACATCTTTTGAAACATCAAACAGAGAAGCAGCAAA
GAGCCAGAACTTGCCTAAACCTTTAACTGAATTTCCGTCTCCTGCTGAACAGCCCACATGCAAGGAGATT
CCTGATTTACCTGAAGAACCTTCTCAAACAGCAGAAGAAGTAGTTACTGTTGCTCTCCGATGTCCCAGTG
GGAATGTCCTGAGGAGAAGGTTTTTGAAGTCCTACAGCTCACAGGTCTTATTTGACTGGATGACGAGAAT
TGGGTACCACATATCTCTATACAGCCTTTCTACTTCCTTTCCCAGACGGCCTCTGGCAGTGGAGGGAGGC
CAGTCGCTGGAGGACATAGGAATAACTGTGGACACTGTACTCATCCTGGAGGAGAAGGAGCAGACCAACT
AG

Translation (233 aa):
MASRGVVGIFFLSAVPLVCLELRRGIPDIVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQ
EMKLRKLEERFYQMTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQPTCKEI
PDLPEEPSQTAEEVVTVALRCPSGNVLRRRFLKSYSSQVLFDWMTRIGYHISLYSLSTSFPRRPLAVEGG
QSLEDIGITVDTVLILEEKEQTN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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