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Report for CCDS74550.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74550.1 Public Homo sapiens 2 C2orf49 24 110 108 CCDS HistoryNCBI Gene:79074Re-query CCDS DB by CCDS ID:74550.1Re-query CCDS DB by GeneID:79074See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74550.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000410049.1 ENSP00000386361.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000410049.1Link to Ensembl Protein Viewer:ENSP00000386361.1Re-query CCDS DB by Nucleotide ID:ENST00000410049Re-query CCDS DB by Protein ID:ENSP00000386361
Original member Current member NCBI NM_001286537.2 NP_001273466.1 Accepted alive Link to Nucleotide Sequence:NM_001286537.2Link to Protein Sequence:NP_001273466.1Re-query CCDS DB by Nucleotide ID:NM_001286537Re-query CCDS DB by Protein ID:NP_001273466Link to BLAST:NP_001273466.1

Chromosomal Locations for CCDS 74550.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 105337588 105337686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105339583 105339749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105342848 105342974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105343101 105343223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105345315 105345371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (573 nt):
ATGGCGGGGGATGTGGGCGGTCGCAGCTGCACGGACTCGGAACTGCTGCTGCACCCGGAGCTGCTGTCCC
AGGAGTTCCTTCTCCTCACTCTGGAGCAGAAGAACATAGCTGTTGAAACTGATGTAAGAGTAAACAAAGA
CAGTCTTACTGACCTTTATGTCCAACATGCAATACCATTGCCTCAGAGGGATTTGCCGAAGAATAGATGG
GGGAAAATGATGGAAAAGAAAAGAGAACAACATGAGATTAAAAATGAGACTAAAAGGAGTAGCACTGTAG
ATGGGTTAAGGAAAAGACCCCTCATCGTATTTGATGGAAGTTCAACAAGTACAAGCATAAAAGTGAAAAA
GACAGAGAATGGAGATAATGATCGACTGAAGCCTCCCCCGCAGAACCATGACTTAACGCATAGGAAAAGT
CCTTCAGGCCCTGTGAAGTCGCCACCATTGTCCCCTGTTGGAACTACTCCAGTGAAGTTAAAGAGAGCTG
CTCCTAAAGAAGAGGCAGAGGCCATGAATAACCTGAAGCCCCCACAAGCAAAAAGGAAGATACAACATGT
TACTTGGCCCTGA

Translation (190 aa):
MAGDVGGRSCTDSELLLHPELLSQEFLLLTLEQKNIAVETDVRVNKDSLTDLYVQHAIPLPQRDLPKNRW
GKMMEKKREQHEIKNETKRSSTVDGLRKRPLIVFDGSSTSTSIKVKKTENGDNDRLKPPPQNHDLTHRKS
PSGPVKSPPLSPVGTTPVKLKRAAPKEEAEAMNNLKPPQAKRKIQHVTWP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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