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Report for CCDS73814.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73814.1 Public Homo sapiens 16 PAQR4 24 110 108 CCDS HistoryNCBI Gene:124222Re-query CCDS DB by CCDS ID:73814.1Re-query CCDS DB by GeneID:124222See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73814.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000574988.1 ENSP00000458683.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000574988.1Link to Ensembl Protein Viewer:ENSP00000458683.1Re-query CCDS DB by Nucleotide ID:ENST00000574988Re-query CCDS DB by Protein ID:ENSP00000458683
Original member Current member EBI ENST00000576565.1 ENSP00000460326.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000576565.1Link to Ensembl Protein Viewer:ENSP00000460326.1Re-query CCDS DB by Nucleotide ID:ENST00000576565Re-query CCDS DB by Protein ID:ENSP00000460326
Original member Current member NCBI NM_001284513.2 NP_001271442.1 Accepted alive Link to Nucleotide Sequence:NM_001284513.2Link to Protein Sequence:NP_001271442.1Re-query CCDS DB by Nucleotide ID:NM_001284513Re-query CCDS DB by Protein ID:NP_001271442Link to BLAST:NP_001271442.1

Chromosomal Locations for CCDS 73814.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 2971192 2971378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 2971515 2971948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (621 nt):
ATGACCATGCCCTGGGGTCAGCTGGGCAAGGATGGCTGGCTGGGAGGCACACATTGCGTGGCCTGCCTTG
CACCCCCTGCAGGCTCCGTGCTCTATCACCTCTTTATGTGCCACCAAGGGGGCAGCGCTGTGTACGCCCG
GCTCCTCGCCCTGGACATGTGTGGGGTCTGCCTTGTCAACACCCTTGGGGCCCTGCCCATCATCCACTGC
ACCCTGGCCTGCAGGCCCTGGCTGCGCCCGGCTGCCCTGGTGGGCTACACTGTGTTGTCGGGTGTGGCCG
GCTGGCGTGCTCTCACCGCCCCCTCCACCAGTGCTCGGCTCCGGGCATTTGGATGGCAGGCTGCTGCCCG
CCTACTGGTATTTGGGGCCCGGGGAGTGGGTCTGGGTTCAGGGGCTCCAGGCTCCCTGCCCTGCTACCTG
CGCATGGACGCACTGGCGCTGCTTGGGGGACTGGTAAATGTAGCCCGTCTGCCCGAGCGCTGGGGACCTG
GCCGCTTTGACTACTGGGGCAACTCCCACCAGATCATGCACCTGCTGAGCGTGGGCTCCATCCTGCAGCT
GCACGCCGGCGTCGTGCCCGACCTGCTCTGGGCTGCCCACCACGCCTGTCCCCGGGACTGA

Translation (206 aa):
MTMPWGQLGKDGWLGGTHCVACLAPPAGSVLYHLFMCHQGGSAVYARLLALDMCGVCLVNTLGALPIIHC
TLACRPWLRPAALVGYTVLSGVAGWRALTAPSTSARLRAFGWQAAARLLVFGARGVGLGSGAPGSLPCYL
RMDALALLGGLVNVARLPERWGPGRFDYWGNSHQIMHLLSVGSILQLHAGVVPDLLWAAHHACPRD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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