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Report for CCDS73159.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73159.1 Public Homo sapiens 10 CCSER2 24 110 108 CCDS HistoryNCBI Gene:54462Re-query CCDS DB by CCDS ID:73159.1Re-query CCDS DB by GeneID:54462See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73159.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359979.8 ENSP00000353068.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000359979.8Link to Ensembl Protein Viewer:ENSP00000353068.4Re-query CCDS DB by Nucleotide ID:ENST00000359979Re-query CCDS DB by Protein ID:ENSP00000353068
Original member Current member NCBI NM_001284241.2 NP_001271170.1 Accepted alive Link to Nucleotide Sequence:NM_001284241.2Link to Protein Sequence:NP_001271170.1Re-query CCDS DB by Nucleotide ID:NM_001284241Re-query CCDS DB by Protein ID:NP_001271170Link to BLAST:NP_001271170.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271170.1 567 Q9H7U1-2 567 100% 0 0

Chromosomal Locations for CCDS 73159.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 84371053 84372469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 84373619 84373905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1704 nt):
ATGGAAGAAAAAACACAAATCAAGACATTTTTGGGTTCCAAGTTGCCAAAGTATGGAACAAAATCTGTAA
GAAGTACATTGCAGCCAATGCCAAATGGGACACCTGTTAATTTATTAGGAACTTCCAAGAATAGTAATGT
CAAAAGTTACATCAAAAATAATGGCTCTGATTGTCCATCATCTCATTCATTTAATTGGAGGAAAGCAAAT
AAATATCAGCTTTGTGCACAAGGTGTCGAAGAGCCTAACAATACTCAAAATTCACATGATAAAATAATTG
ATCCTGAAAAACGTGTTCCTACTCAAGGAATGTTTGATAAAAATGGGATAAAGGGAGGTTTGAAAAGTGT
TTCTTTATTCACATCAAAGTTAGCAAAGCCATCCACTATGTTTGTGTCATCTACAGAGGAGTTAAACCAA
AAGTCTTTTTCTGGACCATCTAATTTGGGTAAATTCACCAAAGGCACATTATTAGGAAGGACTTCATATT
CTTCGATCAATACTCCAAAATCACAGTTGAATGGATTTTATGGAAACCGATCAGCTGGTAGCATGCAAAG
GCCTAGAGCGAACTCCTGTGCCACCAGAAGCAGTTCTGGAGAAAGCTTAGCTCAATCCCCAGACAGTAGT
AAATCTATTAATTGTGAAAAAATGGTAAGGTCACAAAGTTTTTCACATTCCATTCAGAATTCATTCCTTC
CACCTTCATCTATAACCAGATCACATTCCTTTAATAGAGCTGTGGATCTTACAAAGCCTTATCAGAACCA
ACAGCTATCCATTAGAGTGCCTCTACGGTCAAGTATGCTAACAAGAAATTCCCGGCAGCCAGAAGTACTC
AATGGGAATGAACATTTGGGGTATGGATTTAATAGGCCTTATGCTGCTGGTGGAAAGAAGTTGGCTTTAC
CAAATGGCCCAGGTGTAACTTCTACTTTAGGTTATAGAATGGTTCATCCCTCTCTACTGAAATCTAGCCG
ATCTCCATTTTCTGGGACTATGACAGTTGATGGAAATAAAAATTCACCTGCTGACACATGTGTAGAGGAA
GATGCTACAGTTTTGGCTAAGGACAGAGCTGCTAATAAGGACCAAGAACTGATTGAAAATGAAAGTTATA
GAACAAAAAACAACCAGACCATGAAACATGATGCTAAAATGAGATACCTGAGTGATGATGTGGATGACAT
TTCCTTGTCGTCTTTGTCATCTTCTGATAAGAATGATTTAAGTGAAGACTTTAGTGATGATTTTATAGAT
ATAGAAGACTCCAACAGAACTAGAATAACTCCAGAGGAAATGTCTCTCAAAGAAGAGAAACATGAAAATG
GGCCACCACAGGATATGTTTGATTCCCCCAAGGAAAATGAAAAAGCCTTCAGTAAAACTGATGAATGGAT
AGATATAAGTGTCTCTGACAGGAGTGAATGTACAAAACATACTTCTGGGAATAATTTGGTTTCACCAGAT
ACAGACTACAGAGCTGGTTCTTCGTTTGAACTCTCTCCATCTGATAGCTCTGATGGAACATACATGTGGG
ATGAAGAAGGCTTGGAACCCATTGGAAATGTCCATCCAGTTGGGAGCTATGAGTCCTCTGAAATGAACAG
CATAGTATGTATGGATTTATATACTCTTGGAATATTTTGTTTACCCTACTATAGAGAGACTTGTGATATG
ATTGATTTTGTAAAAAATTTATGA

Translation (567 aa):
MEEKTQIKTFLGSKLPKYGTKSVRSTLQPMPNGTPVNLLGTSKNSNVKSYIKNNGSDCPSSHSFNWRKAN
KYQLCAQGVEEPNNTQNSHDKIIDPEKRVPTQGMFDKNGIKGGLKSVSLFTSKLAKPSTMFVSSTEELNQ
KSFSGPSNLGKFTKGTLLGRTSYSSINTPKSQLNGFYGNRSAGSMQRPRANSCATRSSSGESLAQSPDSS
KSINCEKMVRSQSFSHSIQNSFLPPSSITRSHSFNRAVDLTKPYQNQQLSIRVPLRSSMLTRNSRQPEVL
NGNEHLGYGFNRPYAAGGKKLALPNGPGVTSTLGYRMVHPSLLKSSRSPFSGTMTVDGNKNSPADTCVEE
DATVLAKDRAANKDQELIENESYRTKNNQTMKHDAKMRYLSDDVDDISLSSLSSSDKNDLSEDFSDDFID
IEDSNRTRITPEEMSLKEEKHENGPPQDMFDSPKENEKAFSKTDEWIDISVSDRSECTKHTSGNNLVSPD
TDYRAGSSFELSPSDSSDGTYMWDEEGLEPIGNVHPVGSYESSEMNSIVCMDLYTLGIFCLPYYRETCDM
IDFVKNL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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