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Report for CCDS72907.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72907.1 Public Homo sapiens 1 RPRD2 24 110 108 CCDS HistoryNCBI Gene:23248Re-query CCDS DB by CCDS ID:72907.1Re-query CCDS DB by GeneID:23248See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72907.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000401000.8 ENSP00000383785.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000401000.8Link to Ensembl Protein Viewer:ENSP00000383785.4Re-query CCDS DB by Nucleotide ID:ENST00000401000Re-query CCDS DB by Protein ID:ENSP00000383785
Original member Current member NCBI NM_001297674.2 NP_001284603.1 Accepted alive Link to Nucleotide Sequence:NM_001297674.2Link to Protein Sequence:NP_001284603.1Re-query CCDS DB by Nucleotide ID:NM_001297674Re-query CCDS DB by Protein ID:NP_001284603Link to BLAST:NP_001284603.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001284603.1 1435 Q5VT52-3 1435 100% 0 0

Chromosomal Locations for CCDS 72907.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 150364715 150364919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150417596 150417725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150440923 150441023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150443231 150443283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150444251 150444377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150446226 150446401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150457288 150457570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150460060 150460317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150464527 150464727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150470561 150473334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4308 nt):
ATGGCGGCCGGCGGCGGCGGAGGCAGCAGTAAGGCCTCCTCCTCGTCGGCCTCTTCGGCAGGGGCTCTGG
AGTCCTCGTTGGATCGAAAATTCCAGTCGGTAACCAACACCATGGAGTCCATTCAAGGCTTGTCGTCTTG
GTGTATAGAGAACAAAAAACACCACAGTACTATCGTCTATCATTGGATGAAGTGGCTCCGGAGATCTGCA
TATCCCCACCGTTTGAATCTCTTTTACCTTGCCAATGATGTCATACAGAACTGTAAAAGGAAAAATGCAA
TCATATTCCGTGAATCATTTGCTGATGTACTTCCTGAAGCAGCTGCTCTAGTGAAGGATCCATCTGTCTC
TAAGTCTGTAGAACGAATCTTTAAAATCTGGGAAGATAGAAATGTATACCCAGAAGAAATGATTGTGGCA
TTGAGAGAAGCTTTGACATCTACAAATCCAAAAGCTGCTCTCAAGTCTAAGATAGTTGCTGAATTTCGAT
CTCAGGCCCTAATTGAAGAGCTGTTGCTATACAAGCGCTCAGAAGATCAGATAGAACTGAAGGAAAAGCA
GTTGTCAACTATGAGGGTGGATGTGTGCAGCACAGAAACTCTCAAATGCTTAAAAGATAAAACAGGTGGG
AAGAAGTTCTCCAAAGAATTTGAAGAGGCAAGCTCCAAGCTGGAAGAATTTGTGAATGGATTAGATAAGC
AGGTGAAAAACGGACCCTCATTAACAGAAGCACTGGAAAATGCTGGAATTTTCTATGAAGCACAATACAA
AGAAGTAAAAGTGGTGGCTAATGCATATAAAACCTTTGCTAACCGAGTAAACAATTTAAAGAAGAAGTTG
GATCAATTGAAGTCAACCCTTCCAGATCCTGAAGAATCACCAGTTCCTTCCCCAAGCATGGACGCTCCCT
CCCCGACTGGTTCTGAGTCTCCTTTTCAGGGAATGGGAGGTGAGGAATCCCAGTCACCAACCATGGAGAG
TGAGAAATCTGCCACACCTGAACCTGTGACAGATAATCGTGATGTGGAAGACATGGAACTCTCAGATGTG
GAAGATGATGGGTCAAAAATCATTGTCGAGGACAGGAAGGAAAAACCTGCAGAGAAGTCAGCTGTATCCA
CTTCTGTACCTACAAAGCCAACAGAAAATATCTCAAAGGCCTCTTCATGTACCCCAGTGCCTGTGACCAT
GACAGCAACTCCACCTCTTCCAAAGCCTGTGAATACTTCTCTTTCCCCTTCCCCAGCATTGGCTTTGCCA
AACCTGGCTAATGTGGATCTGGCAAAGATCAGTTCCATCCTTAGCAGTTTAACATCAGTCATGAAAAATA
CTGGGGTCAGTCCTGCATCAAGACCTTCTCCAGGAACGCCCACCAGCCCCAGCAACCTCACCAGTGGCCT
GAAAACACCTGCACCTGCCACGACAACATCTCACAACCCTCTGGCAAATATCCTCTCCAAGGTGGAGATC
ACCCCAGAGAGCATTCTGTCTGCACTTTCCAAAACCCAGACACAGTCAGCCCCTGCACTGCAAGGCCTGT
CATCTTTACTTCAGAGTGTTACTGGGAACCCAGTTCCAGCCAGTGAAGCTGCCTCACAGAGCACTTCAGC
CTCCCCTGCCAACACCACAGTCTCTACCATAAAGGGAAGAAATCTGCCCTCCAGTGCCCAACCTTTTATT
CCCAAAAGCTTCAACTATTCTCCTAACTCATCAACTTCTGAAGTCTCTTCAACTTCAGCCAGCAAGGCCT
CAATTGGGCAAAGCCCAGGGCTCCCAAGCACTACTTTTAAACTACCTTCCAACTCTTTGGGGTTTACAGC
TACCCACAATACTAGCCCTGCTGCCCCACCTACTGAAGTTACCATCTGCCAATCTTCAGAGGTCTCCAAG
CCAAAGCTGGAGTCAGAGTCCACCTCCCCAAGCCTGGAAATGAAGATTCACAACTTCTTAAAAGGTAATC
CTGGTTTCAGTGGCTTAAACTTAAACATCCCAATCCTGAGCAGTTTGGGGTCCAGCGCCCCATCAGAGAG
CCATCCCTCAGACTTCCAGCGTGGCCCTACTAGCACCTCAATCGACAACATTGATGGAACCCCTGTACGG
GATGAACGGAGTGGGACACCCACCCAGGATGAGATGATGGACAAGCCCACATCCAGCAGTGTAGATACTA
TGTCCCTGCTTTCTAAGATCATTAGCCCTGGTTCCTCAACACCCAGCAGTACAAGATCACCACCCCCTGG
GAGAGATGAAAGCTACCCCCGAGAGCTCTCCAATTCTGTATCTACATATCGACCCTTTGGTCTGGGCAGT
GAATCTCCCTATAAGCAGCCTTCTGATGGAATGGAGAGACCATCTTCCCTGATGGACTCTTCACAGGAAA
AGTTCTACCCAGATACTTCTTTCCAAGAAGATGAGGATTACCGAGATTTTGAGTATTCAGGGCCTCCACC
CTCTGCCATGATGAACCTAGAGAAGAAACCAGCCAAATCTATCCTGAAATCAAGCAAGCTGTCTGATACC
ACCGAGTACCAGCCAATTCTGTCCAGTTATAGCCACAGAGCCCAAGAATTTGGGGTAAAGTCTGCCTTCC
CTCCATCTGTAAGGGCCCTCCTGGACTCTAGTGAGAACTGTGACCGTCTCTCATCTTCCCCTGGGCTATT
TGGTGCCTTCAGCGTAAGAGGGAATGAACCTGGGTCTGACCGGTCACCATCACCGAGTAAGAATGATTCA
TTTTTCACCCCTGACTCCAACCACAATAGCTTGTCTCAATCTACCACTGGGCATCTCAGTTTGCCACAGA
AGCAGTACCCAGACTCTCCTCACCCAGTCCCACATCGTTCCCTTTTCTCTCCGCAGAACACCCTTGCCGC
TCCCACGGGTCACCCACCCACGTCAGGCGTGGAGAAAGTCCTGGCCTCCACCATTTCCACCACGTCGACG
ATTGAATTTAAGAATATGCTTAAAAACGCCTCACGTAAGCCCTCAGATGATAAGCATTTTGGCCAGGCTC
CCAGCAAGGGCACTCCAAGTGATGGTGTCAGTCTCTCAAACCTCACCCAACCCAGCTTGACCGCCACTGA
TCAGCAGCAACAAGAAGAGCACTACCGCATAGAAACCCGCGTCTCCTCCTCCTGCTTAGACTTGCCTGAT
AGCACAGAAGAAAAGGGGGCCCCTATAGAAACCTTGGGTTATCACAGTGCATCCAATAGGAGGATGTCAG
GGGAGCCGATCCAGACCGTAGAGTCCATCCGAGTTCCTGGGAAGGGAAATAGAGGACATGGGCGTGAGGC
TTCAAGGGTGGGTTGGTTTGATCTGAGCACATCAGGTAGCTCTTTTGACAATGGCCCTTCAAGTGCCTCT
GAGTTGGCATCCCTTGGGGGTGGGGGCAGCGGAGGCCTCACTGGCTTTAAAACAGCACCATACAAGGAAC
GGGCACCTCAATTTCAGGAGAGTGTCGGCAGCTTTCGTTCCAACAGTTTCAACTCAACATTTGAGCATCA
TCTTCCCCCATCCCCCTTGGAACATGGGACACCCTTCCAGAGAGAGCCAGTGGGGCCATCATCTGCCCCA
CCTGTCCCTCCTAAGGATCATGGTGGTATCTTCTCTCGAGATGCACCCACTCATCTACCCTCTGTGGATC
TTTCGAACCCCTTCACAAAGGAGGCAGCCCTGGCCCATGCTGCCCCACCCCCTCCTCCTGGAGAGCACAG
TGGAATTCCTTTCCCTACCCCACCTCCTCCTCCCCCTCCTGGGGAACATAGCAGCAGTGGTGGGAGTGGT
GTCCCCTTTTCTACTCCACCCCCTCCTCCACCCCCTGTTGACCACTCTGGAGTTGTACCCTTCCCAGCCC
CACCACTGGCAGAGCACGGAGTGGCAGGGGCTGTGGCAGTATTTCCCAAGGACCATAGTTCCCTCCTTCA
AGGGACCCTGGCTGAGCATTTTGGGGTACTCCCAGGACCCAGGGACCACGGGGGCCCCACCCAACGGGAC
CTCAACGGCCCTGGCCTTAGCCGTGTACGAGAGAGCCTCACCCTACCCTCCCATTCTCTGGAACACCTGG
GCCCACCCCATGGAGGAGGAGGTGGGGGAGGCAGCAACAGCAGCAGTGGCCCCCCCTTGGGTCCCTCACA
CAGAGACACCATCAGCCGGAGTGGTATAATCTTACGGAGTCCCCGGCCAGACTTTCGGCCTAGGGAACCT
TTTCTCAGCAGAGACCCATTTCACAGTTTAAAGAGACCCAGGCCACCTTTTGCTAGGGGCCCTCCGTTCT
TTGCACCAAAACGCCCATTCTTCCCTCCCAGGTACTGA

Translation (1435 aa):
MAAGGGGGSSKASSSSASSAGALESSLDRKFQSVTNTMESIQGLSSWCIENKKHHSTIVYHWMKWLRRSA
YPHRLNLFYLANDVIQNCKRKNAIIFRESFADVLPEAAALVKDPSVSKSVERIFKIWEDRNVYPEEMIVA
LREALTSTNPKAALKSKIVAEFRSQALIEELLLYKRSEDQIELKEKQLSTMRVDVCSTETLKCLKDKTGG
KKFSKEFEEASSKLEEFVNGLDKQVKNGPSLTEALENAGIFYEAQYKEVKVVANAYKTFANRVNNLKKKL
DQLKSTLPDPEESPVPSPSMDAPSPTGSESPFQGMGGEESQSPTMESEKSATPEPVTDNRDVEDMELSDV
EDDGSKIIVEDRKEKPAEKSAVSTSVPTKPTENISKASSCTPVPVTMTATPPLPKPVNTSLSPSPALALP
NLANVDLAKISSILSSLTSVMKNTGVSPASRPSPGTPTSPSNLTSGLKTPAPATTTSHNPLANILSKVEI
TPESILSALSKTQTQSAPALQGLSSLLQSVTGNPVPASEAASQSTSASPANTTVSTIKGRNLPSSAQPFI
PKSFNYSPNSSTSEVSSTSASKASIGQSPGLPSTTFKLPSNSLGFTATHNTSPAAPPTEVTICQSSEVSK
PKLESESTSPSLEMKIHNFLKGNPGFSGLNLNIPILSSLGSSAPSESHPSDFQRGPTSTSIDNIDGTPVR
DERSGTPTQDEMMDKPTSSSVDTMSLLSKIISPGSSTPSSTRSPPPGRDESYPRELSNSVSTYRPFGLGS
ESPYKQPSDGMERPSSLMDSSQEKFYPDTSFQEDEDYRDFEYSGPPPSAMMNLEKKPAKSILKSSKLSDT
TEYQPILSSYSHRAQEFGVKSAFPPSVRALLDSSENCDRLSSSPGLFGAFSVRGNEPGSDRSPSPSKNDS
FFTPDSNHNSLSQSTTGHLSLPQKQYPDSPHPVPHRSLFSPQNTLAAPTGHPPTSGVEKVLASTISTTST
IEFKNMLKNASRKPSDDKHFGQAPSKGTPSDGVSLSNLTQPSLTATDQQQQEEHYRIETRVSSSCLDLPD
STEEKGAPIETLGYHSASNRRMSGEPIQTVESIRVPGKGNRGHGREASRVGWFDLSTSGSSFDNGPSSAS
ELASLGGGGSGGLTGFKTAPYKERAPQFQESVGSFRSNSFNSTFEHHLPPSPLEHGTPFQREPVGPSSAP
PVPPKDHGGIFSRDAPTHLPSVDLSNPFTKEAALAHAAPPPPPGEHSGIPFPTPPPPPPPGEHSSSGGSG
VPFSTPPPPPPPVDHSGVVPFPAPPLAEHGVAGAVAVFPKDHSSLLQGTLAEHFGVLPGPRDHGGPTQRD
LNGPGLSRVRESLTLPSHSLEHLGPPHGGGGGGGSNSSSGPPLGPSHRDTISRSGIILRSPRPDFRPREP
FLSRDPFHSLKRPRPPFARGPPFFAPKRPFFPPRY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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